Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0457 |
Symbol | |
ID | 4277070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 523199 |
End bp | 525199 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638133215 |
Product | fumarate reductase flavoprotein subunit |
Protein accession | YP_749157 |
Protein GI | 114561644 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.650499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTA TTTATACCGA CACCTTGGTG GTTGGCGCTG GACTAGCTGG ATTAAGAGTC GCGATAGCCT CAAAAGAGCG CGGTCTTGAT ACCTTGGTGT TATCGCTGGT TCCCGCTAAG CGATCGCACT CTGTAGCAGC CCAAGGTGGC ATGCAAGCCA GTTTAGCCAA TACCATAAAA GGTGAAGGTG ATGATGAAGA CATCCATTTT CAAGATACGG TTAAAGGTTC CGATTGGGGC TGCGATCAAG ATGTTGCTCG AATGTTTGCT CACTGTGCAC CCAAAGCGGT AAGAGAGTTA GCTCAGTGGG GCGTTCCTTG GACTCGAGTA ACTAAAGGCG ATAGACAAGT AATTGTTAAC GCTGAAAAAG TCACCATTAC CGAGGCCGAA GCGGCTCATG GACTCATCAA TGCGCGTGAT TTTGGTGGTA CCAAAAAGTG GCGTACTTGC TATACCGCAG ACGGTGCAGG TCATTCTTTG TTGTATGCTG TCGATAATAA AGCCATTTCG TTAGGCATTC CAGTGCATGA ACGGATGGAA GCATTATCGC TTATTCATGA TGGTGAACGT TGCCACGGTG TAATCGCTCG CTGTTTAATT ACGGGGGAAT TACGCGCTTA CATTGCTAAA TCGACCACTA TTGCCACAGG CGGATACGGA CGAATCTATT CTGTATCAAC CAATGCCGTT ATTTGTGAGG GGATTGGCCA AGCGTTAGCG CTAGATACCG GTATCGCGAC ATTAGGAAAT ATGGAAGCGG TACAGTTTCA TCCGACGGCT ATCGTTCCAG TGGGGATTTT AACTACCGAA GGCTGTCGTG GTGATGGTGG TGTGCTGCGC GATAAAGACG GTTACCGCTT TATGCCCGAC TATGAACCAG AGAAAAAAGA ACTGGCTTCG CGAGATGTTG TGTCTCGTAG AATGACCGAA CATATGCGCA AAGGAAAAGG CGTAAATAGC CCTTATGGGC CGCATTTATG GCTGGATATT ACCTTATTAG GTCAAAAGCA CATTGATACC AATTTGCGTG AAGTTAAAGA GATTTGTGAA AACTTTTTAG GTATTGATCC GGTTAAAGAT TGGATCCCAG TTCGACCTAC ACAACATTAT TCTATGGGCG GTATTCGTAC TAAAGCCAAT GGCGAAAGCC CGCAATTATC AGGGCTGTTT AGTGTTGGAG AGGCTGCTTG TTGGGATATG CACGGCTTTA ATAGACTCGG TGGCAACTCC CTCGCAGAAA CGGTGGTTGG TGGAATGATT ATCGGTAAGT ATGTTGCTGA CTTTGGTGAG CAAACTAGTT TAGTCGTTGA TACTGATTTA ATCGCCCAGT TTGGTAAGCA GTTACAAACA GAAGTTGATC AGCTTATTGA GGGTGAAGGA ACAGAAGATC CATTTAAACT TAAAGCTTCA ATGCAAAAAA TTATGATGGA CTACGTCGGG ATTTTCCGCA ATGGGCCTGA ACTTGAAGTG GCTGTTAACC AATTAACCGA ACTGCTTGAA CGTTCGAAAA ACCTCGGTTT AAAGTGTAAA AAACGCCACG CTAACCCTGA ATTAGTTGAG GCGTTAAGGG TTAAACGTAT GTTGAAAGTT GCCCTGACGG TAGCCTGCGG GGCTCATGCG CGTACCGAAA GCCGCGGCGC GCATTCACGA GAAGATTTTC CACAGCGTAA TGACCAAGAC TGGTTGAACC GTACCTTAAC AAGTTGGCCA GATGCTAATA GTTTACGACC AGAAATGAGT TATGAAGCTC TTGATGTGAT GCGAATGGAA TTGCCGCCTG GTTATCGAGG CTATGGTGTT GATAATGCGA TTGCTCATCC TGATACCCAA AAACGTCAGC AACAGGTTGA AGCTATTTTA GCTGAATTAG GTGACGATGC AGATAGGTAT GCCAAGCAAG CGGCATTAAT GCCTTTTGAG CTACCTGAAG AATATCAACC ACGTAATCAG CGCTTCACTG ATACTGTAGC CAAAACCGAC GCTGAGTCTG GAGAAAAGTA A
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Protein sequence | MKIIYTDTLV VGAGLAGLRV AIASKERGLD TLVLSLVPAK RSHSVAAQGG MQASLANTIK GEGDDEDIHF QDTVKGSDWG CDQDVARMFA HCAPKAVREL AQWGVPWTRV TKGDRQVIVN AEKVTITEAE AAHGLINARD FGGTKKWRTC YTADGAGHSL LYAVDNKAIS LGIPVHERME ALSLIHDGER CHGVIARCLI TGELRAYIAK STTIATGGYG RIYSVSTNAV ICEGIGQALA LDTGIATLGN MEAVQFHPTA IVPVGILTTE GCRGDGGVLR DKDGYRFMPD YEPEKKELAS RDVVSRRMTE HMRKGKGVNS PYGPHLWLDI TLLGQKHIDT NLREVKEICE NFLGIDPVKD WIPVRPTQHY SMGGIRTKAN GESPQLSGLF SVGEAACWDM HGFNRLGGNS LAETVVGGMI IGKYVADFGE QTSLVVDTDL IAQFGKQLQT EVDQLIEGEG TEDPFKLKAS MQKIMMDYVG IFRNGPELEV AVNQLTELLE RSKNLGLKCK KRHANPELVE ALRVKRMLKV ALTVACGAHA RTESRGAHSR EDFPQRNDQD WLNRTLTSWP DANSLRPEMS YEALDVMRME LPPGYRGYGV DNAIAHPDTQ KRQQQVEAIL AELGDDADRY AKQAALMPFE LPEEYQPRNQ RFTDTVAKTD AESGEK
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