Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0451 |
Symbol | |
ID | 4278149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 514448 |
End bp | 515704 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638133209 |
Product | kelch repeat-containing protein |
Protein accession | YP_749151 |
Protein GI | 114561638 |
COG category | [S] Function unknown |
COG ID | [COG3055] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAACG CTTCATTACC GCCAATGATG ACATCGATGC TATCGTCATT AAAAGGTACT TCTAGTGTTA TTCAATCATT AGTACTCATC GGGGCTTTGT GTATTACTAC AGTTGATGCA GCACCACTGC AAAACACATC AATTGCCACT ATTCCCCAAC CTGTGAGTAA TAATGCCATC GCATTGGTAC ACAGTAACAA CAAAAGCTAT TTACTCAGTT TTATGGGACT AGCCCCAGAA AAAAACCATC TCGCGGTACA CAATCATGCT TGGGCGTTAT CACTTACAGA AAAAAATTCA CAGTGGAAGT CAATTGCAGA TGTCCCTCAC ATTGCGCCTT TAGCGGGCAG ATTGGCGTCA ATTGCCATAG GTATTAATGA TAAGGCGTAT GTGTTTGGCG GTTATACCGT GTCCGAAAAT CATGACGAAA TTAGCACAAT TGATAATTAC CAATACTCGA TTAAGACCAA TCAATATACT CGTATTGTGG ACATGCCAGT GGCCGTTGAT GACACCACTG CAACAACGTA CCAACAGCGA TACATTTATT TATTTGGCGG CTGGCACAAC GACGGCAACG TCAATTTAGT CCAAGTGTAT GACACCCAGA CCAACACTTG GGCTCAAGCA AGCCCAATAC CTGCACCGGC TGTATTTGGT CAAGCAGTAG GAATGGTAGG TAATCAGCTG GTGTTATGCG ACGGCGTAAA AGTACAAGCT AATATCAACG CGCGCCGCAG TTACCAAGCA TCACCCGTGT GTTTGTATGG TGAAGTCAAT CCAGATAATC ATTTGCGAAT TGATTGGCAA TTACTGCCGC ATTACTCTGT CGCGGCTAAT ATCAACGTAA GTAAATCTAC AATAACTGAA TCAAACGTAA ATCAAGCAAT AGCAAACACT GCCAAATCAA ACACTGCTGC AACTGCTACG GCTCATTACC GCATGGCAGC TACCGGGATT AAAACAACAA CTGGTGGCCA AATTGTATTT TTAGGCGGAA GTGATAATCC GTATAACTAT TCAGGTATTG GTTATAACGG TGAACCTAGC GAGGCAAGCT CGTATGGTTA TCGATTCGAC TTGGCTACTA AGCAATGGCT CACACCGCAG ACACTATCGC AGCCAAGCAT GGATCACCGT GGGTTAGTGT GTTGGCAAGG TAGCTTATTA AGAGTCGGCG GTATGCTACA GCAACAAAAA GTCAGTTCAA AAGTACTGCT AAGCACATTG GCGCAAGGCG AGTCTTGCAC TCAATAA
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Protein sequence | MHNASLPPMM TSMLSSLKGT SSVIQSLVLI GALCITTVDA APLQNTSIAT IPQPVSNNAI ALVHSNNKSY LLSFMGLAPE KNHLAVHNHA WALSLTEKNS QWKSIADVPH IAPLAGRLAS IAIGINDKAY VFGGYTVSEN HDEISTIDNY QYSIKTNQYT RIVDMPVAVD DTTATTYQQR YIYLFGGWHN DGNVNLVQVY DTQTNTWAQA SPIPAPAVFG QAVGMVGNQL VLCDGVKVQA NINARRSYQA SPVCLYGEVN PDNHLRIDWQ LLPHYSVAAN INVSKSTITE SNVNQAIANT AKSNTAATAT AHYRMAATGI KTTTGGQIVF LGGSDNPYNY SGIGYNGEPS EASSYGYRFD LATKQWLTPQ TLSQPSMDHR GLVCWQGSLL RVGGMLQQQK VSSKVLLSTL AQGESCTQ
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