Gene Sfri_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0350 
Symbol 
ID4277158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp379490 
End bp380041 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content43% 
IMG OID638133104 
Producthypothetical protein 
Protein accessionYP_749051 
Protein GI114561538 
COG category[S] Function unknown 
COG ID[COG4648] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTTAA TCCTGCAGAT TATGACGACC TTGGTGATTA TTGCTTATCC TGTTGCGGTG 
TATTTTGGTT TGCAGTATTT ACCACCTGGC ACAATCGCTT TGCTGCTGTG TTTGTTATTA 
TTGCTACGGT TTATGGTCAC TAAGCAGCAA GTAAAATCCA TGACATTGCC AATACTGGTG 
GGCATAGGAT TGACCGCGGC CAGTTTCATT ACTCAACGTA ACGACTGGTT ACTGTTTTAT 
CCGGTGGTGA TAAACCTGAG CATGTTGGGG TTATTCAGTT ACTCACTGAT GAATGGCCCA 
AGCATGATTG AGCGCTTAGC ACGCTTAAAA GAGCCTGATT TACCAGACTC AGCTATACCT 
TACTTACAAA CCGTCACTAA ACTTTGGTGT GGGTTATTTA TTGTAAATGG TGCTGTGGCA 
ACCTATACCG CCATAGCAAC AAGTATTGAA ATATGGACGC TTTACAACGG ACTGATCGCC 
TACCTGTTTA TGGGGTTGCT GCTCAGTGGT GAATGGATTT ATCGTCGCTT TTGGTTGAAA 
AAACATGAAT AA
 
Protein sequence
MRLILQIMTT LVIIAYPVAV YFGLQYLPPG TIALLLCLLL LLRFMVTKQQ VKSMTLPILV 
GIGLTAASFI TQRNDWLLFY PVVINLSMLG LFSYSLMNGP SMIERLARLK EPDLPDSAIP 
YLQTVTKLWC GLFIVNGAVA TYTAIATSIE IWTLYNGLIA YLFMGLLLSG EWIYRRFWLK 
KHE