| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0346 |
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| Symbol | |
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| ID | 4277154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 374361 |
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| End bp | 375923 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638133100 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_749047 |
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| Protein GI | 114561534 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase
[TIGR01226] phenylalanine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACA CTTCTTCACC GTCATCATCT GCCGAAAAAA CGGTGCATTT AGGCCAAAGC
TACCTGAGCC TTGAACAAGT GGTCGCTGTC GCCAAGGGCG CAACGGTCAA ACTAGCGGAT
GCTGCAGACT ATGTTGAATA TATTCAAAAA GGCGCCCGTT TCATCGACAG TTTGTTACAT
GAAGAAGGCG TGGTATATGG CGTCACCACA GGTTACGGTG ACTCTTGTAC CGTCAATGTC
AGCTTAGACT TAGTCCATGA ATTACCGCTG CATTTAACCC GTTTTCATGG TTGTGGTTTA
GGTGATGTAT TTAGCCCAAT GCAAGCCCGC GCGATTATGG CTTGCCGTTT AAATTCATTG
GCGGTGGGTA AGTCAGGTGT CAGCTATCTG CTGCTGCAGC GCATTGAATG GCTATTAAAT
AACGATATCA CCCCGGTTAT TCCTCAAGAA GGTTCGGTTG GCGCCAGCGG CGATTTAACC
CCTCTATCTT ATCTTGCTGC AGTACTTGTT GGCGAACGTG AGGTCATATA CCAAGGTAAA
CGCCAAGCGA CCAAAGATGT TTATCTGAAA TTCGGCATGA TGCCATTAAC TCTGCGCCCT
AAAGAAGGCC TCGCGTTAAT GAATGGCACA GCAGTGATGA CCGCACTGGC CTGTTTAGCC
TATGACCGAT CGCAGTACTT AACTCGTTTA TCAAGCCGTA TTACTGCCAT GGCATCGTTA
ACGCTTAAAG GCAACGCAAA TCATTTTGAT GAAATTTTGT TTGCCGCCAA ACCCCATCCA
GGACAAAACC AAATTGCCAG TTGGATCCGC GAAGACTTAA ATCATCATGC GCATCCACGT
AATTCTGACC GCTTACAAGA CCGCTATTCC ATTCGCTGTG CACCGCACAT CATTGGCGTA
CTGCAAGATG CTTTACCTTT TATGCGTCAG TTTATTGAAA CCGAACTCAA TAGCGCTAAC
GACAACCCGA TTGTCGATGC CGAGGGCGAA CATATCCTCC ATGGCGGTCA CTTTTATGGC
GGCCACATTG CCTTTGCCAT GGATGCGATG AAAAATGCGG TGGCCAATAT CGCCGACTTA
ATTGATCGTC AAATGGCCTT AGTCATGGAC CCTAAATTCA ACAATGGTTT ACCGGCTAAT
TTATCTGCCG CAGAAGGCGA ACGTCGCGCC ATTAACCATG GTTTTAAAGC GGTACAAATC
GGTGTTTCGG CTTGGACTGC TGAAGCATTA AAAAATACCA TGCCTGCCAG TGTGTTTTCA
CGTTCAACTG AATGCCACAA CCAAGACAAA GTGAGCATGG GCACCATTGC CGCACGCGAT
TGCATGCGGA TTTTACAACT GACAGAGCAA GTGGCTGCCG CCGCATTATT GGCCATGAGC
CAAGGCATTC AACTACGCGT TATACAGAAA GAGTTAGACC CCAATTCACT AACACCATCA
CTTGCCAATA CTTTGGCCCA AGTCAGTGAA GATTTTGAAC TGCTTACCGA AGACCGTCCA
TTAGAAGCAG TACTACGCCA AACAGTCGAC AAAATTCAAC TAGGCCTGTG GGAGGTGTGT
TAA
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| Protein sequence | MSNTSSPSSS AEKTVHLGQS YLSLEQVVAV AKGATVKLAD AADYVEYIQK GARFIDSLLH
EEGVVYGVTT GYGDSCTVNV SLDLVHELPL HLTRFHGCGL GDVFSPMQAR AIMACRLNSL
AVGKSGVSYL LLQRIEWLLN NDITPVIPQE GSVGASGDLT PLSYLAAVLV GEREVIYQGK
RQATKDVYLK FGMMPLTLRP KEGLALMNGT AVMTALACLA YDRSQYLTRL SSRITAMASL
TLKGNANHFD EILFAAKPHP GQNQIASWIR EDLNHHAHPR NSDRLQDRYS IRCAPHIIGV
LQDALPFMRQ FIETELNSAN DNPIVDAEGE HILHGGHFYG GHIAFAMDAM KNAVANIADL
IDRQMALVMD PKFNNGLPAN LSAAEGERRA INHGFKAVQI GVSAWTAEAL KNTMPASVFS
RSTECHNQDK VSMGTIAARD CMRILQLTEQ VAAAALLAMS QGIQLRVIQK ELDPNSLTPS
LANTLAQVSE DFELLTEDRP LEAVLRQTVD KIQLGLWEVC
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