| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0308 |
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| Symbol | |
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| ID | 4277203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 337046 |
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| End bp | 338425 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133062 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_749009 |
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| Protein GI | 114561496 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTGTC GATTTTTGTT AAACAGCTTT CCTCGCAGCA ACCAGCGATC ATCCTCAAGG
TTAAATCGAT GGATTCTACT ATGGAGTTTA GTTATTGCTG TTGTTTGCCT TACCAGCTTT
GTGCCTACTG ATGCCCAGGC TGCGCCCTCG CCTGATACTG TGAAACAACT CATACAGATT
AACGACCCAA GCAGCGTCAT AGACATTGAA ATACAAGGCT CTGTCGTCCA CCTAAACGGC
TCCGTCACTG AGCAAGCGAG TAAAGAGCGC ATACTGCAAA CCATAGCCGC TTTACCTGAT
GTGACTCAGG TTGTGGATAA TATTCACTTG CAACCTATTG CGCCCTTATC TTTAGCTCCC
CTGCAACAGG ATGCTGAGCA ATTTTGGGAC AAAGCCTTAC TCTATTTACC GCGTTTGGCT
TTAGGGCTGT CGATATTCTT GCTGCTATTT TGGCTTTCTC ATCCTTTAGC ACGCTTATTG
ATTAGTCCCT TAGCTTGGGT AACAAAAAGC GAGTTGATTC GATTAGTGAT GCAGCGCAGC
ATCAGTGTAT TGATCATCTT ATTGGGACTG TATATATTTT TGCGCCTCGC TGGCCTAACG
CAGTTTGCGG TCGCGATTAT TAGCAGCACT GGTGTAATCG GTCTGATTTT AGGTTTTGCC
TTTAAAGATA TCGCCGAAAA CTTTATTTCC AGCTTACTAC TCAGTGTGCA GCGTCCGTTC
AAATTAGGGG ATGTAATATC CGTTGAAGGG AATTTGGGGG TGGTAAAGCA AGTCACAGCA
AGGGCTACCA CGTTAGTCGA CTACGACGGA AATCATATCC AAATCCCCAA TGCCACTATC
TATAAAAACG TGATTAAAAA TCTTACTGCC AACCCGAGAA TGCGTGGCCA TTTTGTCATT
GGCATTGGTT ATGATGCAAG TATCCGTAAG GCTCAGGATA TTGCTATGGA GATTATGAGC
GATCATCACG GCGTACTCGC AGATCCCGAG CCACAGGTAT TAATAAAAAA CCTTGGTCCA
TCGACGATTA ATCTGCAAGT GTATTTTTGG GTCAATGCTG AAACTCACAG TGTTCCAAAA
GTGGCTTCAA TTTTAATGCG CTTGCTGGTG CGCGCTTATG AAGCAAATCA GATAAGCTTG
CCGGACGATG CCCGCGAACG TATTTTCCCT CAAGGGATAC AATTAGTCAC CAACGGACAT
CCGCAAGATG AAACACCTCT GAATACGATA CAGAGCACTG AGCACAACAG CAACAAAGCC
CAAGAGTCAT TAGAAGATAC CCATAATGAG ACTAGCGATG ACATCAGCAG CGATACCGAT
GATATACGTC AACAAGCGGC ACAATCACGA GATCCTGAAA GTGGCGCCAA TATTATCTAA
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| Protein sequence | MICRFLLNSF PRSNQRSSSR LNRWILLWSL VIAVVCLTSF VPTDAQAAPS PDTVKQLIQI
NDPSSVIDIE IQGSVVHLNG SVTEQASKER ILQTIAALPD VTQVVDNIHL QPIAPLSLAP
LQQDAEQFWD KALLYLPRLA LGLSIFLLLF WLSHPLARLL ISPLAWVTKS ELIRLVMQRS
ISVLIILLGL YIFLRLAGLT QFAVAIISST GVIGLILGFA FKDIAENFIS SLLLSVQRPF
KLGDVISVEG NLGVVKQVTA RATTLVDYDG NHIQIPNATI YKNVIKNLTA NPRMRGHFVI
GIGYDASIRK AQDIAMEIMS DHHGVLADPE PQVLIKNLGP STINLQVYFW VNAETHSVPK
VASILMRLLV RAYEANQISL PDDARERIFP QGIQLVTNGH PQDETPLNTI QSTEHNSNKA
QESLEDTHNE TSDDISSDTD DIRQQAAQSR DPESGANII
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