Gene Sfri_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0288 
Symbol 
ID4278563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp317399 
End bp318121 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content40% 
IMG OID638133042 
Producthypothetical protein 
Protein accessionYP_748989 
Protein GI114561476 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTGT TTGCAATTTT GACTGAAGCA TTTAACTTTT TTCGAAACCA CATCCGTCAG 
CTTGCCGTAC TGACTCTGCC ATTACTGTTA ATCCAAGTCG CTATTCAACT TTGGCTAGGT 
AATGAAATGT TGCAGGCTGA TGCTGAAAAC CCTCAATTCG GTGCTGTTCA TGCTGCAGCA 
ATGATGGTGC TATTGTTGGT TTTTTCATTT TTAATTGCCG CATTAACCTT ATATTTAGAG 
CTGCGCTCCC AAGGTCACGA TCTTGCGCCG GCACAAATAT TAAAGGCTAG TTTACCATTT 
GTACCGCCAT TATTACTGGC TGGAGTATTT TCTGGTTTAG CTATTTTAGC GCCAGTGATG 
ATCTTTGCTG CGTTTGGCCC ACTATGGTTG ATAGGCTTAA TCGTGAGCTT GTACTTGTTT 
TCTCGCCTAG CCTATGTGAA CTTTATGGTG GTGGTTGAAC GTTTAACACC TTTAGAAGCG 
ATTAAGAGTA GCTTTAAATT CAGTGGCCCA ATAACAATTA AAACCATTGC GGTATTATTG 
CTGTACGTGC CATTGTCTCT ATTAGCTGGC ATGTTTTCAC AAGTCGCGAT GCAAGTTGGT 
TTTCCACTAC AACTGGTAGT AGAAGCTACA TTTTCGTTCT TAGGTTTGTT TGTTAATATT 
GCGTTATTTA GATTGTACAT GGTTAATCGT AAAACACCGG ATGCTGATAA AGCAGAGGGA 
TAA
 
Protein sequence
MSLFAILTEA FNFFRNHIRQ LAVLTLPLLL IQVAIQLWLG NEMLQADAEN PQFGAVHAAA 
MMVLLLVFSF LIAALTLYLE LRSQGHDLAP AQILKASLPF VPPLLLAGVF SGLAILAPVM 
IFAAFGPLWL IGLIVSLYLF SRLAYVNFMV VVERLTPLEA IKSSFKFSGP ITIKTIAVLL 
LYVPLSLLAG MFSQVAMQVG FPLQLVVEAT FSFLGLFVNI ALFRLYMVNR KTPDADKAEG