| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0279 |
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| Symbol | |
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| ID | 4278082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 307891 |
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| End bp | 309438 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133033 |
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| Product | O-succinylbenzoate-CoA ligase |
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| Protein accession | YP_748980 |
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| Protein GI | 114561467 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.384875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTCAC CTTTACATCA AGCAGCATTA AATCATCCAG ATGCTATTGC TATTGAAGGT
CGCCATGAAG CCATCGATCC AAGCATCACT ACTGGTAATA AGACTTGCAA CAATACATGC
ACCACTACTC GCGTCAGTTA TGCTCAGTTA AGTGGTTTAG TTCACTGTGT AGCGCAACAA
TTACAATCAC AAGGTGTTAA GCATGGCGAT ATTGTGGCTT GTTTGTCACA CAATAATATT
GAAATGATTT GTCTATATTG GGCATGCATT GATGCAGGAT GGATATTTTT ACCTTTGTCA
CCTCGATTGG CTGATGTGCA AATTAATCAG CTTATCAAAC GCTTTGATCT TCAATGGTTA
TGGACCGATA ACGTTAGCAG AAAAACCGCG ATTGAGATTG CCAACTGGCT CGATATTGAA
TTGCCTCAAA AAGTAGATCA ACTAATCAAC CAAGCTGTTG AGATATCACC GCATCAAGCT
TCCAATATTA TTCTCACATC TGGTTCAAGT GGTACGCCCA AAGCTGCGGT ACATTGCTTA
ACGAACCATC TGAGCAGCGC AAAAGGGGCT GCAACGTTTA TTGCTTTAGC GCCTTCTGAT
GCTTGGCTAT TATCGTTACC ACTGTTTCAT ATTGGTGGCT TGGCCATTAT TCATCGTTGC
ACTTTGGCTG GAGCCTGCAT TGTATTGCGA GATCCCGCAT TAACACTGGC CGAACAACTT
ACAAGTAGCC ATATCACCCA TGTGTCATTA GTGCCAACCC AAGCGATACA GATACTCCGG
CAACATCCCG CTGCGTTTAC CAATATAAGT GCATTACTGT TGGGTGGTGG CGTTATAGAG
CCCGCACTTA TTGATGCACT ACAACATCTA CATATTAACG CTTACACCAG CTATGGTATG
ACAGAGATGA GCTCGCAAAT TACCACCGCT AAAGCCAATT TATTAGGCCA TCATGGTTGT
CCTTTGCCTT CAAGACAACT GAGGTTGAAA GACGGGTTGA TTTGGGTAAA AGGCGAGTGT
TTATTTTTAG GCTATTTAAC CGACCAGGGG TTAAGCTTAC CATTAGATGA GCAAGGCTGG
TTTTGTACCC ACGACAAAGG ACAACTAGAT CTAGAGGGGC AACTGAGTAT TTTAGGCCGT
ATGGATAACA TGTTTATTTG TGGCGGTGAG AACATTCATC CAGAACAACT TGAAGCGGTG
TTATTAACCC ATCCTAATGT CGCACAAGCA ATTGTATTTG CCATAGACGA TATAATTTTC
GGTCACTTAC CTGCTGCCAT TATTGATTAT TGTGTCGCAG ATAATAATAC TAATGCAATT
GGACTCGAAA CCGTTAATGC CAAAGCAGCT GATTTAAATG GTGTTAATAT CGATAACATC
AACTTGCAGC TGAGTCAGTT AGTTGAATCA ACTTTGGCGC GTTTCAAGCG ACCAAGACAA
TTTTTTGGTT GGCCAAAAGA CATCGTCTCC AGTGGCTTAA AAGTGCCAAG AAAAAGCATC
ATCAACGCAA TTCAAACCCA GATAGACGCC GCAAAAACAG CCTCATAA
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| Protein sequence | MMSPLHQAAL NHPDAIAIEG RHEAIDPSIT TGNKTCNNTC TTTRVSYAQL SGLVHCVAQQ
LQSQGVKHGD IVACLSHNNI EMICLYWACI DAGWIFLPLS PRLADVQINQ LIKRFDLQWL
WTDNVSRKTA IEIANWLDIE LPQKVDQLIN QAVEISPHQA SNIILTSGSS GTPKAAVHCL
TNHLSSAKGA ATFIALAPSD AWLLSLPLFH IGGLAIIHRC TLAGACIVLR DPALTLAEQL
TSSHITHVSL VPTQAIQILR QHPAAFTNIS ALLLGGGVIE PALIDALQHL HINAYTSYGM
TEMSSQITTA KANLLGHHGC PLPSRQLRLK DGLIWVKGEC LFLGYLTDQG LSLPLDEQGW
FCTHDKGQLD LEGQLSILGR MDNMFICGGE NIHPEQLEAV LLTHPNVAQA IVFAIDDIIF
GHLPAAIIDY CVADNNTNAI GLETVNAKAA DLNGVNIDNI NLQLSQLVES TLARFKRPRQ
FFGWPKDIVS SGLKVPRKSI INAIQTQIDA AKTAS
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