| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0214 |
|---|
| Symbol | |
|---|
| ID | 4277948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 236331 |
|---|
| End bp | 236843 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638132968 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_748915 |
|---|
| Protein GI | 114561402 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACGAC GTTTAATGGA TTACTTTCGC TTAGTGTTGT TTATTTGTGG TGTCTTGATT
GGTATTCAAG TCCCTGCGTT TGTCGAACAA TACGGCCAAC GACTTGAAGC TCATCAGCTT
GAAGCTAAGC TCAGTTTGGC AGAATTTCAG CGTGATGCGG ACCGTTTTTT TGCTGGAGAC
ATCAGTAAAC TTATCCGCCA CTATCAACAA AATAACGATC CGGTTTTTAG TGCTGGTGGT
GAAAGTATTG AGTCAATATA CCAACGTTAT ACATCACTCA CCGAAGCGTT GGGCCGTTTT
AATCAACACA GTTATAGTCC TTATCAGCAA ATAGCATTAG CCCCACAAAA AGACATTCAA
GCTGAGGTCT GGCAGGCTTA TAGCCATGTA ATTTTATTGA AACCAGAGGC GATTGCCATT
GGGTTGCTGC TAGGGTTATT GATCTCTATA TTGTGTGAGT CAGTATTATC TATTTTGTAT
TTGGGTTGTC GCAGGGTGTT TGCCCCAAGA TAA
|
|---|
| Protein sequence | MIRRLMDYFR LVLFICGVLI GIQVPAFVEQ YGQRLEAHQL EAKLSLAEFQ RDADRFFAGD
ISKLIRHYQQ NNDPVFSAGG ESIESIYQRY TSLTEALGRF NQHSYSPYQQ IALAPQKDIQ
AEVWQAYSHV ILLKPEAIAI GLLLGLLISI LCESVLSILY LGCRRVFAPR
|
|---|
| |