| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0204 |
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| Symbol | |
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| ID | 4278130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 225563 |
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| End bp | 227164 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638132958 |
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| Product | PepSY-associated TM helix domain-containing protein |
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| Protein accession | YP_748905 |
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| Protein GI | 114561392 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCT CAATGAAACC AGACTCTCCC GTACAGCACA AAGTCGTTAA AAATCTCATC
GAAGCCCACA GTTGGCTTGG GTTAATTATT TCACCTTTAC TGTTTTTGGT ATTTTGGGCT
GGCGCGGTGA CCTTGTTTCA CGATGAAATT GCCCAGTGGG CCATTACGCC TCATCATCCA
GTCGATAATA CCCAAGCAGA TATTCCTTTA GCGAAACTGG TAGAGCAAAA GTTGGCTGAA
TACCCAGTAG ATCAAGCTGG CCGATTTCGA ATAAATATGC CGACTGAGCT AGTACCTTAT
TATATTTTTT ACTTCGATGT GTTTGGAGAT ACTCCGCAAT CGGACCGCCA GTCGATGGCG
ATATTGGTTG ACCCTAAAAG CGGCGAAACC GTTGCGGGCA AAGATGACTT TTACTTATCG
CAATTTATTT ACCGCTTGCA TTACAACCTT GATTTACCCG GTGGCAGTTA TCTTATTGGG
GTCGTGACGC TGATTTTTTT GTTTGCACTC GTGTCAGGTA TTTTTATCCA TGCGCGTAAA
TTACTGAAAC ATTTCTTTTT GTATCGGGTT GATAAACAGC GCCGGGATAA ATTACTCGAT
CTTCATACTG TAGTCGGAGT AATGACAATT CCCTTTACCT TGATGTATGC GCTAAGCGGC
TTGATCCTTA ACTTGGCCAT AGTGTTCCAA CTGGCTTTTG TGGTGTTTAT TTATCAGGGC
GATCGACAAG CATTGTTTAA CGATGCCGGT TTTAATCGTA CCAGCGAACC GCGAAGTGAA
ACGTCACTGG ATATGAGCAA TGCATTTACC TTAATTGAAC AAACTAAACA GCAATCGAAT
TTTGAGTTAC GTAATATTAT TTTCCACCAT TACGGCGCCG ATAATGCTCT GGTACAAGTG
CGTGGAACCG ACACGGTTAA TTTTGCTCAA CGAGATGAAG TGACCTACCG GGTGCAGGAT
GGCACTGTGA TGGATAAGGT TAATGCCGAT AATTACAATG TATTCCGCCA GGGTAGAGAT
GTATTAGTGA CATTGCATTT TAGTAATTTT GCTGGCTTAG ATATCCGTAT TTTGTACTTT
ATTTTGGCGA TGGCCATCAG CGCCATGATT GTTACCGGCA ATATGTTATG GATAAATAAG
CGCAGTGCTC AGCGCCAATC TTCACAGCGC AGTATTGCTA TAGTAACCGC GATGACGATT
GGTGGCTGTG GTGGCATTAT TGTCGCGACA GCAGTTGGAT TTTTGTGTGA GCGACTATTA
CCTGCAACCT TATCAGGGCG AAGTGAATGG TTAGTGGGGT GTTTTGTAAC GTCACTATTG
CTCGTTATGT TGTGCAGTAT AAAAGTGACC GATATTAAGC GTCATCTCAG CCAGTTGCTG
TTACTCACCA GTGGCATATT AATCATCACG ATTGTTGCAG ATTGGCTGTT ATTTTCTGAG
CAAATAATAG CGTTATGGCA AAGTGGTTAT CATGGGGTCA TCGGGATACA AGTTGGCATG
ATGCTGGTAA CGGCAGTGTG TTTATTGACC GCCAATAAGT TAGGTGTATC ACCTCGGTCG
CAGCCAGCAA TGGTTAAAAA TATTACTCCC GCTAATGGAT AG
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| Protein sequence | MNTSMKPDSP VQHKVVKNLI EAHSWLGLII SPLLFLVFWA GAVTLFHDEI AQWAITPHHP
VDNTQADIPL AKLVEQKLAE YPVDQAGRFR INMPTELVPY YIFYFDVFGD TPQSDRQSMA
ILVDPKSGET VAGKDDFYLS QFIYRLHYNL DLPGGSYLIG VVTLIFLFAL VSGIFIHARK
LLKHFFLYRV DKQRRDKLLD LHTVVGVMTI PFTLMYALSG LILNLAIVFQ LAFVVFIYQG
DRQALFNDAG FNRTSEPRSE TSLDMSNAFT LIEQTKQQSN FELRNIIFHH YGADNALVQV
RGTDTVNFAQ RDEVTYRVQD GTVMDKVNAD NYNVFRQGRD VLVTLHFSNF AGLDIRILYF
ILAMAISAMI VTGNMLWINK RSAQRQSSQR SIAIVTAMTI GGCGGIIVAT AVGFLCERLL
PATLSGRSEW LVGCFVTSLL LVMLCSIKVT DIKRHLSQLL LLTSGILIIT IVADWLLFSE
QIIALWQSGY HGVIGIQVGM MLVTAVCLLT ANKLGVSPRS QPAMVKNITP ANG
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