| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0175 |
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| Symbol | |
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| ID | 4277245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 185244 |
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| End bp | 185729 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638132925 |
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| Product | cytochrome c-type biogenesis protein CcmE |
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| Protein accession | YP_748876 |
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| Protein GI | 114561363 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2332] Cytochrome c-type biogenesis protein CcmE |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.268493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATCCAA GACGTAAAAA GAGATTAACC CTCGCCGTTG CATTAATTGC GGGCGTTGCA
GCCGTTGCTT CATTACTATT GTACGCGCTA AATTCAAACT TGAATTTATT CTATACACCG
TATGAAATTA CCCACGGGAA AAACGATACA GGTGTAATGC CTGAAGTTGG ACAACGGATC
AGAGTCGGTG GCATGGTAAC AATAGGATCG ATGAAACGCG ATCCAGATAG CCTACACGTG
GAGTTTGCAG TACATGATTC AGCGGGTGGG ACCGTTTTCG TCACCTATGA CGATTTACTA
CCGGACTTAT TTAGAGAAGG ACAAGGTATC GTTGCCCAAG GCGTACTGGT TGAGTCTGGA
AAACTAGAAG CCACTGAAGT ACTCGCGAAA CATGATGAAA ATTACATGCC ACCTGAAGTT
GCTGAAGCTA TGGGACAAAC GCATGAAAAA CCAACATATA ATCAAAAAGC TCTTGAAGAC
AAATAA
|
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| Protein sequence | MNPRRKKRLT LAVALIAGVA AVASLLLYAL NSNLNLFYTP YEITHGKNDT GVMPEVGQRI
RVGGMVTIGS MKRDPDSLHV EFAVHDSAGG TVFVTYDDLL PDLFREGQGI VAQGVLVESG
KLEATEVLAK HDENYMPPEV AEAMGQTHEK PTYNQKALED K
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