Gene Sfri_0147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0147 
Symbol 
ID4277812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp170557 
End bp170868 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content45% 
IMG OID638132897 
Productribosomal protein S10 
Protein accessionYP_748848 
Protein GI114561335 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000495355 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAACC AAAGAATCCG TATCCGCTTG AAAGGCTTTG ATCATCGTTT AATTGATCAG 
TCTACAGCGG AAATCGTTGA AACTGCTAAG CGTACAGGCG CGCAGGTACG TGGTCCTATT
CCACTACCAA CACGCAAAGA GCGTTATACC GTTTTGATCT CTCCGCACGT TAATAAAGAT
GCTCGTGATC AGTACGAAAT TCGTACCCAC AAGCGTTTAG TTGACATCGT AGAGCCAACA
GAAAAGACTG TAGACGCATT AATGCGTTTA GATCTTGCGG CTGGTGTCGA CGTTCAGATT
AGCTTAGGTT AA
 
Protein sequence
MQNQRIRIRL KGFDHRLIDQ STAEIVETAK RTGAQVRGPI PLPTRKERYT VLISPHVNKD 
ARDQYEIRTH KRLVDIVEPT EKTVDALMRL DLAAGVDVQI SLG