Gene SeSA_B0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0111 
Symbol 
ID6515229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand+ 
Start bp93616 
End bp94623 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content60% 
IMG OID642745155 
ProductTriE protein 
Protein accessionYP_002112987 
Protein GI194733870 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3704] Type IV secretory pathway, VirB6 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGAA TATTCGTCGG ATTAAACAGC CACATCATGG AGGGGTTTGA CAGCGTGCTC 
ACCAGCGTGG CCGCCGATAC GGGGGGGTGG ATGGCACACC TGTTCTCCGT CGCGGTGCTC 
TCGCTGTACA TCACGTGGCG CGCCTACCAG ACGATGGCAG GCAAGCTAGT CCGCCCCTTC 
GAGGAGATCG TGTGGGACGT GAGCCGGATG CTCATCATCA TGATTTTCGT CACCAACGCC 
GGAGGCTATC TCGATCTGGT TTCGGATGCC ATCACCGGCC TGCGGGACGG ATTCAGCGGC 
GACGCGTCGA TCTGGGCGCG GCTGGATACC GTCTGGGAAA AGGCTCAAGC ACTTGGGGAG 
AAGCTTTACT CTTATGATGA TTCAACCTAT GTCGCTCTAA AAGGCACTCT GGCGCAGTTT 
CTGGTCTGGG CAGGCGTCAT GTTACTGGTA GGCATCACGG CCATCATTAA CCTGATAGCC 
GAACTGGTGA TGCTGCTGAT GCTGGCGACC GCCCCGATCT TTATCTACTG CCTGATGTGG 
TCGTGGTTCC GGGATATGTT CAGCAACTGG CTCAGAATTA TTCTGGGCTG CATCCTTACA 
TCCCTGTTCA GCGGCATCGC CCTGACGGTG GTAATGGATT ACCTGGACTA CATCCTGGCG 
GGCGCCACAA AAGCATCCGA TGCCAACTAC CTGACTCTGG CCGTTCAGGT CTTCCTCGGC 
ACGGCGGGTG CCGCCGCCGT GATGGTCCTG ACCTATAAGC TGGCCGAGGC GCTTGCCGGT 
GCATCCGCAC AGGGTGCCGC TCAGGCACTT GCCGCGTCGG GAGTAGGTTC AGCCCGTCAA 
TCCGCCTCCT CCGCAGCCGG TGCGGTGGGG GATAAAGCCT CACAGAACCT TAACAGCACC 
GGCAGCGCAA CGGCCTCGTC TGCCTCCACG GCCTCCCGCG CCACCGGCGA TGCGCGCAGC 
CGCAGCCGCG CCGCCGTTCA GCGGATGCAG GAACGCTACC AGAGATAA
 
Protein sequence
MSGIFVGLNS HIMEGFDSVL TSVAADTGGW MAHLFSVAVL SLYITWRAYQ TMAGKLVRPF 
EEIVWDVSRM LIIMIFVTNA GGYLDLVSDA ITGLRDGFSG DASIWARLDT VWEKAQALGE 
KLYSYDDSTY VALKGTLAQF LVWAGVMLLV GITAIINLIA ELVMLLMLAT APIFIYCLMW 
SWFRDMFSNW LRIILGCILT SLFSGIALTV VMDYLDYILA GATKASDANY LTLAVQVFLG 
TAGAAAVMVL TYKLAEALAG ASAQGAAQAL AASGVGSARQ SASSAAGAVG DKASQNLNST 
GSATASSAST ASRATGDARS RSRAAVQRMQ ERYQR