| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_B0007 |
|---|
| Symbol | sopA |
|---|
| ID | 6515126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011092 |
|---|
| Strand | - |
|---|
| Start bp | 4467 |
|---|
| End bp | 5642 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642745057 |
|---|
| Product | plasmid-partitioning protein SopA |
|---|
| Protein accession | YP_002112889 |
|---|
| Protein GI | 194733786 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1192] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAGTA TGGGACTCAT GGATACACTC AACCAGTGCA TAAGTGCTGG TCATGAAATG
ACGAAAGCAA TCGCCATTGC ACAGTTTAAT GATGACAGTC CGGAAGCCCG GAAAATAACC
CGGCGCTGGA GGATTGGTGA AGCGGCAGAT TTAGTTGGCG TGTCATCTCA GGCTATCAGG
GATGCCGAGA AAGCTGGCCG GCTGCCGCAC CCTGATATGG AAACCCGTGG GAGAGTTGAG
CAACGCGTTG GTTATACCAT CGAACAAATC AATCACATGC GGGATGTATT TGGTACACGA
CTGCGCCGTG CTGAAGATGC GTTTCCGCCG GTGATTGGCG TTGCAGCTCA CAAAGGTGGT
GTTTACAAAA CCTCAGTATC CGTTCACCTG GCTCAGGATC TTGCTCTGAA AGGACTCCGT
GTTCTGCTTG TTGAAGGCAA TGACCCACAG GGAACTGCTT CTATGTATCA CGGATGGGTG
CCCGATCTTC ATATTCATGC TGAGGACACT CTCCTGCCCT TTTATCTTGG GGAAAAGGAT
GACGCCAGCT ACGCTATAAA GCCCACCTGC TGGCCTGGCC TTGATATCAT CCCGTCCTGT
CTGGCACTGC ACCGCATTGA AACCGAGCTG ATGGGGAAAT TTGACGAAGG CAAATTACCT
GCTGACCCGC ACCTGATGCT CCGTCTGGCC ATTGAAACTG TCGCTCATGA TTATGACGTG
ATAGTTATCG ACAGTGCACC CAACCTTGGT ATCGGTACGA TAAATGTTGT ATGCGCTGCT
GATGTTCTGA TTGTCCCTAC TCCGGCAGAG CTGTTCGACT ACACCTCCGC ACTGCAGTTT
TTCGATATGC TTCGTGACCT GCTTAAGAAC GTGGATCTTA AAGGCTTCGA GCCAGATGTC
CGTATTCTGC TTACCAAATA CAGTAATAAT AATGGCTCAC AGTCCCCGTG GATGGAAGAA
CAAATTCGGG ATGCCTGGGG AAGCATGGTC CTTAAAAATG TTGTGCGCGA AACGGATGAA
GTCGGTAAAG GTCAGATCCG TATGAGAACC GTTTTTGAAC AGGCTATTGA TCAACGTTCT
TCAACCGGTG CCTGGCGTAA TGCCCTCTCT ATCTGGGAGC CTGTTTGCAA TGAGATTTTT
GATCGTCTGA TTAAACCACG CTGGGAGATT AGATAA
|
|---|
| Protein sequence | MFSMGLMDTL NQCISAGHEM TKAIAIAQFN DDSPEARKIT RRWRIGEAAD LVGVSSQAIR
DAEKAGRLPH PDMETRGRVE QRVGYTIEQI NHMRDVFGTR LRRAEDAFPP VIGVAAHKGG
VYKTSVSVHL AQDLALKGLR VLLVEGNDPQ GTASMYHGWV PDLHIHAEDT LLPFYLGEKD
DASYAIKPTC WPGLDIIPSC LALHRIETEL MGKFDEGKLP ADPHLMLRLA IETVAHDYDV
IVIDSAPNLG IGTINVVCAA DVLIVPTPAE LFDYTSALQF FDMLRDLLKN VDLKGFEPDV
RILLTKYSNN NGSQSPWMEE QIRDAWGSMV LKNVVRETDE VGKGQIRMRT VFEQAIDQRS
STGAWRNALS IWEPVCNEIF DRLIKPRWEI R
|
|---|
| |