Gene SeSA_A4846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4846 
Symbol 
ID6515513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4704492 
End bp4705037 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content50% 
IMG OID642749777 
Productputative fimbrial chaparone 
Protein accessionYP_002117506 
Protein GI194737130 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.417477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAATA AGAAAATTAT GATCCTGGCA ATGTTAACTG CCGTAGCATC CACACCGGTA 
TTTGCCCAGA ACACGATTAC GTTCAATGGC AAAATTTACG ATCAGGCGTG TACGGTTCAG
GTTAATGGCT CCACGGATAC CACCATTGAT TTAGGTAATT ACAGCAAAGA ACGCATCGCG
GAAAAAGGTG CCACAACCGA TTACGTGCCG TTTACCGTAA GCCTGGTTAG CTGCCCGGAA
GCAGGGACTG GCGTACCAAC CCAGGCCATG TTCCGCTTCC ACGGCGCAAC AGATGATTCC
AACCCAACGT ACTTCAAAAA CGCGGACGAA GGATCGGAAA CGGGCGCCGC GGGTGTCGGT
ATTTCTATTC AGAACGCCTC ACATAGCGAT GTGACAGATA ACACGGATGA TGCCGCAGTA
AACCTGCCAA CCGACGGCTC GACAGCAGAC TTTACCTATT ACGCCGCCAT GGCAAACGAT
GGTTCCGCAA CCGTAACCGG TGGAGATGTT AGCACTCAGG TTACGTATAC CGTTTCGTAT
CAGTAA
 
Protein sequence
MFNKKIMILA MLTAVASTPV FAQNTITFNG KIYDQACTVQ VNGSTDTTID LGNYSKERIA 
EKGATTDYVP FTVSLVSCPE AGTGVPTQAM FRFHGATDDS NPTYFKNADE GSETGAAGVG
ISIQNASHSD VTDNTDDAAV NLPTDGSTAD FTYYAAMAND GSATVTGGDV STQVTYTVSY
Q