Gene SeSA_A4781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4781 
Symbol 
ID6516928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp4641143 
End bp4641784 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content56% 
IMG OID642749713 
Producttransporter LysE family 
Protein accessionYP_002117445 
Protein GI194736153 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.917767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGG TTACAACGTT ATTTCCTCCG GCGTTTCCCG CACTGGCGCT GGCGCATTTT 
ATGGCGCTGC TCAGCCCGGG TCCGGACTTC TTTTTGCTGG TCGGTTACGC CGTACGCTAT 
CGGCTGCGCG GTAGCGTCGG GCTGTGCCTC GGCATTGCGG CGGGAAATGG GCTCTATATT 
CTGCTGGTGG TGATTGGGTC AGGGCTACTA CGTCAGACGC CGCTGCTCTT TACCATCATC 
GAACTATTAG GTGCCGCCTA CCTGCTATGG GTGGGCCGTC AACTGTTGAA AAGCCGCGCC 
GGGCCGCTGG AGTGGCGGTA CGCCGCATCG GCATGTCCGT CACTGGCAAA ACAACTATTA 
CTGGGGCTAG GTTCATCGCT GTTGAATCCG AAAAATGCTC TGTTTTATCT GGCGCTAATG 
ACCGCCCTGC TGGGCCCAAA CGTGACCGTT ACACAGCAGG CCATATGTGG AATCTGGATG 
ACCAGCGTAG TGTTACTCTG GGATCTGCTG CTGATAACGC TTATCGCCCT GCCGCAAATT 
CAAGGTCGTC TGGGTAATCT TGTCTGGAAA ATTGAACGCG CCGCCGGCGG CATTCTGATC 
GCCTTTGGCT GCTGGATTGT GTGGCAGTTC ATTACAAGTT AA
 
Protein sequence
MEQVTTLFPP AFPALALAHF MALLSPGPDF FLLVGYAVRY RLRGSVGLCL GIAAGNGLYI 
LLVVIGSGLL RQTPLLFTII ELLGAAYLLW VGRQLLKSRA GPLEWRYAAS ACPSLAKQLL 
LGLGSSLLNP KNALFYLALM TALLGPNVTV TQQAICGIWM TSVVLLWDLL LITLIALPQI 
QGRLGNLVWK IERAAGGILI AFGCWIVWQF ITS