Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A4479 |
Symbol | |
ID | 6516397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 4346721 |
End bp | 4347254 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642749430 |
Product | bacteriophage Mu Gp45 protein |
Protein accession | YP_002117166 |
Protein GI | 194734250 |
COG category | [S] Function unknown |
COG ID | [COG4384] Mu-like prophage protein gp45 |
TIGRFAM ID | [TIGR01644] phage baseplate assembly protein V |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0023741 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTAACC ATCCTCTTCA GAACATGATA ACGCGCGCAG TCATTACCGC GATTGATACC GTCAGAAAAT GCCAGACTGC CGGACTGAAA CTTATTGCCG GTGAAAAAAA AGAGAATGTG GAGCATCTTG AACCTTACGG TTTCACCTCT GCAGCACAGA ATGGCGCAGA AGCGGTGGTA TTGTTTCCCG GCGGTGACCG TTCGCACGGA GTGGCTGTGG TTGTGGCTGA CCGCCGCTTC AGACTGAAAG GGCTGGCGCG CGGGGAAGTC GCGCTATATG ACGATCAGGG GCAGTCGGTC ACATTAACCC GCGCCGGAAT AGTGATAAAT GGCGGCGGAA AGCCAGTTAT TTTCACGAAT GCCACTAAAG CACGTTTTGA AATGCCGATC GAATCCACTG GCGATATCAG GGACAACTGT GACAGCAGTG GAAAAACGAT GGCTGAAATG CGCACGACCT ATAACGGTCA TACCCATAAA GAAAATGGCG ATGGCGGCGG TATAACCGAT AAGCCTGTCC AACCCATGAG CTGA
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Protein sequence | MANHPLQNMI TRAVITAIDT VRKCQTAGLK LIAGEKKENV EHLEPYGFTS AAQNGAEAVV LFPGGDRSHG VAVVVADRRF RLKGLARGEV ALYDDQGQSV TLTRAGIVIN GGGKPVIFTN ATKARFEMPI ESTGDIRDNC DSSGKTMAEM RTTYNGHTHK ENGDGGGITD KPVQPMS
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