Gene SeSA_A4479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4479 
Symbol 
ID6516397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4346721 
End bp4347254 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content52% 
IMG OID642749430 
Productbacteriophage Mu Gp45 protein 
Protein accessionYP_002117166 
Protein GI194734250 
COG category[S] Function unknown 
COG ID[COG4384] Mu-like prophage protein gp45 
TIGRFAM ID[TIGR01644] phage baseplate assembly protein V 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0023741 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTAACC ATCCTCTTCA GAACATGATA ACGCGCGCAG TCATTACCGC GATTGATACC 
GTCAGAAAAT GCCAGACTGC CGGACTGAAA CTTATTGCCG GTGAAAAAAA AGAGAATGTG
GAGCATCTTG AACCTTACGG TTTCACCTCT GCAGCACAGA ATGGCGCAGA AGCGGTGGTA
TTGTTTCCCG GCGGTGACCG TTCGCACGGA GTGGCTGTGG TTGTGGCTGA CCGCCGCTTC
AGACTGAAAG GGCTGGCGCG CGGGGAAGTC GCGCTATATG ACGATCAGGG GCAGTCGGTC
ACATTAACCC GCGCCGGAAT AGTGATAAAT GGCGGCGGAA AGCCAGTTAT TTTCACGAAT
GCCACTAAAG CACGTTTTGA AATGCCGATC GAATCCACTG GCGATATCAG GGACAACTGT
GACAGCAGTG GAAAAACGAT GGCTGAAATG CGCACGACCT ATAACGGTCA TACCCATAAA
GAAAATGGCG ATGGCGGCGG TATAACCGAT AAGCCTGTCC AACCCATGAG CTGA
 
Protein sequence
MANHPLQNMI TRAVITAIDT VRKCQTAGLK LIAGEKKENV EHLEPYGFTS AAQNGAEAVV 
LFPGGDRSHG VAVVVADRRF RLKGLARGEV ALYDDQGQSV TLTRAGIVIN GGGKPVIFTN
ATKARFEMPI ESTGDIRDNC DSSGKTMAEM RTTYNGHTHK ENGDGGGITD KPVQPMS