Gene SeSA_A4477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4477 
Symbol 
ID6515788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp4344326 
End bp4345666 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content54% 
IMG OID642749428 
Producttail/DNA circulation protein 
Protein accessionYP_002117164 
Protein GI194735966 
COG category[R] General function prediction only 
COG ID[COG4228] Mu-like prophage DNA circulation protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.00305287 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTTTT TCTCCTCAAC AGGCTGGCGC GGTCGCCTGC GTGATGCATC ATTTCGTGGA 
GTACCTTTCT CCGTTGAAGA TGATGAAAGC ACCTTTGGAC GCCGCGTACA GGTACATGAA 
TATCCGAACA GGGATAAGCC CTGGACGGAG GATTTAGGTC GCGCCACGCG CCGCCTGACG 
ATAAATGCTT ATCTTGTCGG TGATGATTAC GCAGACAGGC GGGATCGTCT TATTGGTGCC 
ATTGAAACCG CAGGCCCTGG TACGCTGGTC CATCCGCAGT ATGGCGAAAT GCAGGGCAGC 
ATTGACGGAC AGGTCAGGAT CACTCACAGC AGTACAGAAG GGCGCATGTG TCGTGTCTCC 
TTTCAGTTTG TGGAAAGTGG GGAACTTTCT TTTCCGGTGG CAGGAATGGC AACGGCGAAG 
CGCCTGGAAA CATCAGGCGG GCTTTTCGAC GATGCGATTG ACAGTATGTT TTCCACATTC 
TCGTTGTCAG GTATTTCTGA TTTTATCCAG AACGATGTCA TTGCCGATGC TGCCTCCATG 
CTGGGCGATG TTGCCGATGC TTTCAGGATG GTTGACTCCG GCGTGTCTGC CGCAATGCGG 
CTGTTACAGG GGGATTTGTC TGTCATTCTG ATGCCACCGA GCGCCGCAAG TGATTTCGTT 
AACGCACTGC AAAAAGCCTG GCGCTCAGGT GACAGGCTCA GAGGCAGTAC ATCGGATCTG 
GTCACGATGA TAAAAACGAT GTCAGGTATC ACGCTTGATC CCGGTCTTTC CCCCCGTGGC 
ACCTGGCCCA CTGACTCCGG ATCTGCTGCG AAACAGAAAA TGCAACGCAA TATGATCGCA 
GCCGCCATCA GGACAACAGC CATCAGCACA GCCGTCCACG CCGTGACAAC ACTGAAGCAG 
CCGCGTGATG TACCTGATGT CCGGGGCGTA AATCAGCCTG CAGGAACAGG CCGTGACTCA 
GACATTATCA CTGTCATGCA CCCGGCGCTG GATGGTGTAC AGACAGTCAG TAATGGCAGC 
TCTCCACCGA ATTATGAAGA TCTGAAAGCT ATCCGGACCG CGCTCAATGC TGCGATTGAC 
CAGGAGCAGT TGCGTATCCG GGATGATGTG CTTTTCCAGC AAATTTCGGT TATGCGGACG 
GATCTCAATC GCGATATTTC TGCACGACTG GCACAGGTTG AACGTACTGC ATTGCGAACG 
CCTGATGATG TTCTGCCTGC ACTGGTACTG GCTGCAGCCT GGTATGACGA CGCCGGGCGG 
GAATCTGATA TCCTCACTCG TAATCCCGTT CCCCATCCGG GATTTATCCC GGTTGAGCCG 
CTGAGGGTTC CGGTACGATG A
 
Protein sequence
MAFFSSTGWR GRLRDASFRG VPFSVEDDES TFGRRVQVHE YPNRDKPWTE DLGRATRRLT 
INAYLVGDDY ADRRDRLIGA IETAGPGTLV HPQYGEMQGS IDGQVRITHS STEGRMCRVS 
FQFVESGELS FPVAGMATAK RLETSGGLFD DAIDSMFSTF SLSGISDFIQ NDVIADAASM 
LGDVADAFRM VDSGVSAAMR LLQGDLSVIL MPPSAASDFV NALQKAWRSG DRLRGSTSDL 
VTMIKTMSGI TLDPGLSPRG TWPTDSGSAA KQKMQRNMIA AAIRTTAIST AVHAVTTLKQ 
PRDVPDVRGV NQPAGTGRDS DIITVMHPAL DGVQTVSNGS SPPNYEDLKA IRTALNAAID 
QEQLRIRDDV LFQQISVMRT DLNRDISARL AQVERTALRT PDDVLPALVL AAAWYDDAGR 
ESDILTRNPV PHPGFIPVEP LRVPVR