Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A4262 |
Symbol | |
ID | 6518633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 4136114 |
End bp | 4136950 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642749222 |
Product | transcriptional activator RhaS |
Protein accession | YP_002116969 |
Protein GI | 194736850 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTAC TGCATAGCGT GGATTTTTTT CCATCAGGTA AAGCGCCCGT GGCGATTGAA CCCCGTCTGC CGCAAGCCGC TTTCCCTGAA CATCATCATG ATTTTCATGA AATCGTGATT GTGGAACACG GTACGGGCAT TCATGTATTC AACGGGCAGC CGTATACCAT CAGCGGCGGT ACCGTGTGTT TTGTTCGCGA TCACGACCGG CATTTATATG AACATACCGA CAACCTATGC CTGACGAATG TACTGTGGCG TTCGCCGGAC GCTTTCCAAT TCCTGGCGGG GCTGGATCAA TTGCTGCCGC AGGAGCAGGA TGGTTACTAT CCTTCGCACT GGCGGGTGAA TCAGAGTGTG TTGCAGCAGG TGCGCCAGTT GGTCGGTCTG ATGGAGCGCG CCGGAGACAG CATGGATGCG CCTGCCGTGG CGAATCGCGA AATTTTGTTT ATGCAACTAC TGGTGTTGTT GCGCCGCAGT AGCCTGATGG AAGGCGCAAC CAATAACGAC GCCAAACTCA ACCAACTGAT GGCATGGCTG GAAGAACATT TTGCGGAGGA GGTCTGCTGG GAGGCGGTAG CTGAACAGTT TTCGCTGTCG CTACGCACGC TGCATCGTCA GCTTAAACAG CATACCGGGC TGACGCCGCA ACGTTACCTT AATCGCCTGC GTTTGATCAA AGCCCGGCAT TTATTACGCC ATAGCGATCA TAGCGTGACA GAAATCGCGT ACCGCTGCGG TTTTGGCGAC AGTAACCACT TTTCGACTCT GTTTCGCCGA GAATTTAACT GGTCGCCGCG GGATATCCGT CAGGGACGCG ATGCGATAAT CCAGTAA
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Protein sequence | MTVLHSVDFF PSGKAPVAIE PRLPQAAFPE HHHDFHEIVI VEHGTGIHVF NGQPYTISGG TVCFVRDHDR HLYEHTDNLC LTNVLWRSPD AFQFLAGLDQ LLPQEQDGYY PSHWRVNQSV LQQVRQLVGL MERAGDSMDA PAVANREILF MQLLVLLRRS SLMEGATNND AKLNQLMAWL EEHFAEEVCW EAVAEQFSLS LRTLHRQLKQ HTGLTPQRYL NRLRLIKARH LLRHSDHSVT EIAYRCGFGD SNHFSTLFRR EFNWSPRDIR QGRDAIIQ
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