Gene SeSA_A4040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4040 
Symbol 
ID6516295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3912206 
End bp3913345 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content56% 
IMG OID642749010 
Productouter membrane protein 
Protein accessionYP_002116772 
Protein GI194737960 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0729] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATCGCT GCCATTACCG ACTGTTGCTT TGCGTCGTCG GTGTGCTGTC CGGCGTGGCG 
CAGGCGGCGC TGCCCAGCCG CAGCCAGGTG GACGGCTGGC TACAACAAAT GGGGGATAGC 
GATACTTACG ATGCCGCCAA AGGCGTCAAC TGGGGAGTAA TGCCCGGGCC ATTTTATACC 
CCTGAACTGG GGCTGGGCAT CGGCACCGCC ATCGTCGGTA TGTATCGCCC CGATCCTGCC 
GATAAGGTTA GCCAGGTATC CACGCTGTCG CTGAGCAGCT ATTTCAGCTC CACAGGCGCT 
TTTGGCGTAA GCCTGCAAAA TTACGCTTTT TTCGCGCAAG ATCGCTGGCG TTTCTTCCTC 
ACTGGCGCAT TGAGCGACAC GCCCACTTAC TATTGGGGAC AGGGTTTTGC CGCTGGTGAT 
AAAGACAGCC ATAAGCAGGC CTATACTGCG CAGGTGCTGG ATCTGCAACC CATGCTGTAT 
CGTCGGCTTG TTAACAATAT CTATCTTGGC GTTGGCTGGA CGCTGGATGT ACAGCACGCC 
GCGCAAATTG ATGAGACCGA TCCGCCCAAA ATTCAAAGTA CCGCGCAGGG CTGTTCTTCA 
CTGAGTAACG GCGGTAGCGT TGAGATTAGC TGGGATGATC GTGATTTTAT ACCTAACCCA 
CGCAAAGGGC AGTATGCCAC CCTTCGCTAT ACCCACTTCG CACCGGACGT CGGTAGCGAT 
ACGCGGTTTG ATGAATACCA ACTGCACTAT AGTCGTTACC ATGCCGTCAA TGATAAAGAC 
GTGCTGGCCT GGGAAGCTGA CGGCGCCTTT ACCCAGGGCG ACGTGCCGTG GAATATGCTG 
CCGCTGCTGG GCAGTAACCA TCGTATGCGC GGCTATTATG AAGGGCGCTA TCGCGATAAA 
AATGCTATCA GCGGTCAGCT GGAATATCGC CATAAGCTGA GCTGGCGGCA TGGCGTTGTC 
GGTTGGGTGG GCGCGGGCAC CATGGGATCG TCTTTGCACC ATCTGGATGA CGGGCGATGG 
CTGCCTTCTG CGGGCGTGGG CTATCGCTTT GAGTTCAAGC CGCGCGTCAA CGTGCGGCTG 
GATTACGGCG TGGGCAAAGC TAGCAGCGGT TTTTATTTTC AGGTAGGAGA AGCATTTTGA
 
Protein sequence
MNRCHYRLLL CVVGVLSGVA QAALPSRSQV DGWLQQMGDS DTYDAAKGVN WGVMPGPFYT 
PELGLGIGTA IVGMYRPDPA DKVSQVSTLS LSSYFSSTGA FGVSLQNYAF FAQDRWRFFL 
TGALSDTPTY YWGQGFAAGD KDSHKQAYTA QVLDLQPMLY RRLVNNIYLG VGWTLDVQHA 
AQIDETDPPK IQSTAQGCSS LSNGGSVEIS WDDRDFIPNP RKGQYATLRY THFAPDVGSD 
TRFDEYQLHY SRYHAVNDKD VLAWEADGAF TQGDVPWNML PLLGSNHRMR GYYEGRYRDK 
NAISGQLEYR HKLSWRHGVV GWVGAGTMGS SLHHLDDGRW LPSAGVGYRF EFKPRVNVRL 
DYGVGKASSG FYFQVGEAF