Gene SeSA_A3943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3943 
Symbol 
ID6516769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3813596 
End bp3814498 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content53% 
IMG OID642748915 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002116678 
Protein GI194735115 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.000214101 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTTGC TGCAAATGGA TATGAACCTG TTAAAAGTAC TGTATGTGCT GCTGGAGACG 
AGCTCTACGG GGAAAACGGC GCAAAAGCTG GCTTTGTCGC CTTCTGCGGT AAGTCATGCG 
TTAATGAGAT TGCGCGATGC GCTAAACGAC CCGTTGTTTC GACGGGAAGG GAACCGCCAG 
ATTCCTACGC CTTATGCGCA GGCGCTGCGT GACAAATTGG CGCCTGTGTT TGTTTCGCTT 
AATGAGGAGC TGTTTGGCGA TAAAGAGAAC GGCTCCCGTT GTTTCCGGGT GGTACTTCCT 
CCCGCATTGA ACGCGCTGCT TACGCCCGTT CTCGCAGAGA AAGGTCATCT TCATCAGGCG 
GTGATCGAGT GCCTTCCTTT TGCCCGCCGA CCCTGGCGTG ATGAACTGTT GGATAGCTCG 
GTTGATTTGG TGCTGGCAAT TGGCGACCAT CAAAAGCAGG TCAGCGCTCT GCATTACGAG 
CGGGTGGGGA CTACGCGTTT GATTGCGGTT TATGGCGCGC CATTGCGTTC ACGTCTGGAG 
AATGCCGCAG AGTTGAATTT TGCTGATCTA CAGCATTATC AGCACATTTA CTGTTTGCCG 
TGGACAAAAG AGAACAACGA ACTGGACAGG CAGCAGGCTC GTGCCGGGTT TGAACGTCCG 
CTGGCGTTTG TTTGTCATGA TTACAGTCAA CTTGCGCCTG CTGTCCAGTC GGCGCCGCTA 
ATGGCGATTG TACCGCGCCC CTGGTATGAA AATTTATCCG ATAAGCGCGG TCTTTTTGTC 
CTGCCGCTTG CCGGGGAGCA GGCGGAAGGC GCTATTTTTA TGCAGTATCG GGCTTCAACG 
GTAGAGTGGA AGCGGCGCCT TATCGACGCT ATTCGCCGGA AATTAAAAAC GTACTACCGA 
TAA
 
Protein sequence
MNLLQMDMNL LKVLYVLLET SSTGKTAQKL ALSPSAVSHA LMRLRDALND PLFRREGNRQ 
IPTPYAQALR DKLAPVFVSL NEELFGDKEN GSRCFRVVLP PALNALLTPV LAEKGHLHQA 
VIECLPFARR PWRDELLDSS VDLVLAIGDH QKQVSALHYE RVGTTRLIAV YGAPLRSRLE 
NAAELNFADL QHYQHIYCLP WTKENNELDR QQARAGFERP LAFVCHDYSQ LAPAVQSAPL 
MAIVPRPWYE NLSDKRGLFV LPLAGEQAEG AIFMQYRAST VEWKRRLIDA IRRKLKTYYR