Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3911 |
Symbol | rfaC |
ID | 6519281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 3782652 |
End bp | 3783605 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642748884 |
Product | ADP-heptose:LPS heptosyl transferase I |
Protein accession | YP_002116647 |
Protein GI | 194737435 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0446452 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGGTTT TGATCGTTAA AACATCATCA ATGGGCGACG TATTACATAC CCTGCCTGCG CTTACCGACG CGCAACAGGC GATTCCGGGG ATTCAATTTG ATTGGGTTGT CGAAGAAGGG TTTGCGCAAA TTCCGTCCTG GCACAGTGCT GTCGATCGCG TGATTCCCGT CGCTATTCGC CGTTGGCGCA AAGCCTGGTT TTCCGCGCCC ATTAAAGCGG AACGCACAGC CTTTCATCGG GCGGTATGCG CATACCAATA CGACGCTGTG ATTGATGCGC AGGGGCTGGT GAAAAGCGCG GCGCTGGTGA CGCGTCTGGC GCATGGGATA AAGCACGGTA TGGACTGGAG TACCGCCCGC GAACCGCTGG CCAGCCTGTT TTATAACCGT AAACACCATA TCGCAAAGCA ACAACATGCG GTTGAACGGA CGCGCGAACT GTTCGCCAAA AGTCTGGGAT ACGATAAACC GCAGTCGCAG GGCGATTATG CCATCGCAAA ACATTTTCTG CATTGCCAGC AGGCGGTTAG CGATCCGTAT GCGGTGTTTT TACATGCCAC GACCCGCGAT GATAAACACT GGCCGGAAGC AAACTGGCGC GAGCTTATCG GCCTGGTGGG CAACACCGGA TTACGGATAA AACTTCCCTG GGGCGCGCCT CATGAGGAGG CCCGGGCTAA ACGACTGGCC GAAGGCTTTG ACTATGTGGA TGTGTTACCG CGTATGAGCC TGGAGGAGGT CGCCAGAGTG CTGGCTGGCG CAAAATTTGT CGTATCGGTT GATACCGGCC TGAGCCATCT CACCGCCGCG CTCGACAGAC CGAATATTAC GCTATATGGC CCAACGGACC CTGGGTTAAT TGGAGGTTAT GGGAAGAACC AAATGGCATG CTGCTCACCA GAACAGAACC TGGCGAATTT AGATGCCACA AGCGTATTTG GAAAGATTCA TTAA
|
Protein sequence | MRVLIVKTSS MGDVLHTLPA LTDAQQAIPG IQFDWVVEEG FAQIPSWHSA VDRVIPVAIR RWRKAWFSAP IKAERTAFHR AVCAYQYDAV IDAQGLVKSA ALVTRLAHGI KHGMDWSTAR EPLASLFYNR KHHIAKQQHA VERTRELFAK SLGYDKPQSQ GDYAIAKHFL HCQQAVSDPY AVFLHATTRD DKHWPEANWR ELIGLVGNTG LRIKLPWGAP HEEARAKRLA EGFDYVDVLP RMSLEEVARV LAGAKFVVSV DTGLSHLTAA LDRPNITLYG PTDPGLIGGY GKNQMACCSP EQNLANLDAT SVFGKIH
|
| |