Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3832 |
Symbol | |
ID | 6519342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 3703217 |
End bp | 3704224 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642748808 |
Product | regulatory protein LacI:Periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_002116572 |
Protein GI | 194737554 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0370934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGTTC AAAATAAAAA ACGCGCAAAG TTGATTGATG TTGCCCGCCA TGCAGGCGTG TCGCCAGGGA CGGTATCCAA TGCCTTGCAC AACACCCGCT TTGTCGAGCC GCAGACGCGA CGGCGTATTG AAGAGGCCAT TGTTGCGCTC AACTACACGC CGAATATTCG CGCCCGCCAG TTGCGAACCG GCAAAACCAA TACCATTGCC TTGCTCTCTT CGGTGCCGCT GGCGATTGCC TCCGGTGCGT CACGACTGGG ATTTATGATG GAGGTGGCGT TAACGTCCGC GATGATGGCG CTGGAAAAAC AGCATGCGCT GATTCTGGTG CCGCCGGGGG CAAATCCACT GGATGCCGTC AGCTTTGACG CGGCGATCCT GATTGAGCCG GCGGAGAACG ACCCGCAGCT CCAGGCGCTG GCGCAAGCGG GCATTCCCTG CGTCACCATT GGCCGCACGC CGGGCGCCGA CACGCCTGTG CCGTGGGTTG AGCTGCACTC GGCGGCAACA GCACAGCTTC TGCTAACGCA TCTGGAGGCC TCCGGCGCCA GCAAATGTGC GTTATTTGTC GGTAACACTC GGCGAACATC AGTTCAGGAG AGCGAAGCGG CTTACCAGCG CTGGTGCGCG GGGCGCCAGG ACCCCGTCGT CTACTCTCTC AATGAAAGCG AGGGTGAAAA TGCCGGCTAC CAGGCCGCGC AGCAGCTATT ACAGGCGCAT CCCGACGTTG ACGGCGTGCT GGTGCTGATC GATACCTTTG CCAGCGGCGC GGTACGCGCT TTTCAGGAAC AGGCAGTAGC TATCCCGGAG CGGATGCGCG TGGTCACCCG CTATGATGGT ATCCGCGCGC GCGAATCGCT GCCGCCGCTG ACGGCAGTGA ATATGCATCT TGATGAGGTG GCGCGACAGG CAATCACACT ATTATTTGAT TTGCTGGCGG GCAAGAAGGT CAGTCACAGC GACGGGATCA TGCCTGAACT GGTGGTGCGA GCGTCAACCT GCTGGTGA
|
Protein sequence | MAVQNKKRAK LIDVARHAGV SPGTVSNALH NTRFVEPQTR RRIEEAIVAL NYTPNIRARQ LRTGKTNTIA LLSSVPLAIA SGASRLGFMM EVALTSAMMA LEKQHALILV PPGANPLDAV SFDAAILIEP AENDPQLQAL AQAGIPCVTI GRTPGADTPV PWVELHSAAT AQLLLTHLEA SGASKCALFV GNTRRTSVQE SEAAYQRWCA GRQDPVVYSL NESEGENAGY QAAQQLLQAH PDVDGVLVLI DTFASGAVRA FQEQAVAIPE RMRVVTRYDG IRARESLPPL TAVNMHLDEV ARQAITLLFD LLAGKKVSHS DGIMPELVVR ASTCW
|
| |