Gene SeSA_A3823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3823 
Symbol 
ID6516619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3692903 
End bp3694201 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content44% 
IMG OID642748799 
Productinner membrane transport protein YhaO 
Protein accessionYP_002116563 
Protein GI194735868 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00814] serine transporter 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGACG ACACATTACC ATTAAATAAC AGTAACGCTA CGACCACACC GCTTTCAACG 
AGGTTACCGT TTACAAAATA TGATTTTGGC TGGGTGCTCT TGTGTATCGG TATGGCAATC
GGCGCCGGTA CCGTCTTAAT GCCAGTGCAA ATAGGTCTCA AGGGGATCTG GGTATTTATT
ACCGCTTTTA TCATCGCCTA TCCCGCTACC TATATTGTGC AGGATATTTA TCTAAAAACG
TTATCTGAAA GCGAAACCTG TGACGATTAT ACGGATATTA TCAGTCACTA TCTTGGCAAA
AACTGGGGCA TTTTTCTCGG TGTAATCTAT TTTCTTATGA TTATCCACGG GGTGTTTATT
TATTCCCTGT CGGTGGTGTT TGATAGCGCC TCCTATATCA AAACCTTCGG CCTTACTGAA
GCCGATCTTT CGCAGTCTAT TATCTATAAA GTCGCGATTT TCGCCGTGCT GGTGGCGATT
GCCTCCGGCG GGGAAAAATT ATTATTTAAA ATTTCCGGCC CGATGGTGGT GGTAAAAGTC
GGGATCATTC TGATATTCGG TTTTGCGATG ATCCCACACT GGAATCTTGA TAATATTTCC
GCCTTTCCCG CCGCATCGGT TTTCTTTCGC GACGTACTGC TCACTATCCC ATTTTGCTTC
TTTTCTGCGG TCTTCATTCA GGTACTAAAC CCAATGAACA TCGCCTATCG TAAGCGCGAA
CCTGACCGTG TGCTGGCCAC CCGGATGGCG ATTCGCACGC ATCGCATTAG CTATATTACG
CTGATTGCCA TTATTCTCTT TTTCTCGTTC TCGTTTACCT TTTCGATTAG CCATGAAGAG
GCGGTATCAG CGTTCGAGCA GAATATTTCC GCCCTTGCAC TGGCAGCTCA GGTAATCCCT
GGCCATATCA TCCACATTAC CTCTACCATC CTCAATATTT TTGCCGTACT TACCGCGTTC
TTTGGTATTT ATTTAGGTTT TCACGAAGCG CTTAAAGGTA TTGTGCTGAA TGTATTGAGT
CGTATTATGG ATGTCAAAAA CGTCAACCCA CTGTTACTGA CATCTGGAAT CTGTGTCTTT
ATCGTGGTGA CTCTGGTTAT TTGGGTTTCG TTTCGCGTCT CAGTATTGGT CTTTTTCCAG
TTAGGCAGTC CGCTTTATGG CATTGTCGCG TGTATTATTC CCTTTTTCCT GATTTATAAA
GTAGCGCAAC TGGAAAAATT ACGCGGCCTG AAAACCTGGC TTATTCTGTT ATATGGAATA
TTGTTGTGCC TGTCGCCGTT ATTAAAATTG ATTGAATAA
 
Protein sequence
MQDDTLPLNN SNATTTPLST RLPFTKYDFG WVLLCIGMAI GAGTVLMPVQ IGLKGIWVFI 
TAFIIAYPAT YIVQDIYLKT LSESETCDDY TDIISHYLGK NWGIFLGVIY FLMIIHGVFI
YSLSVVFDSA SYIKTFGLTE ADLSQSIIYK VAIFAVLVAI ASGGEKLLFK ISGPMVVVKV
GIILIFGFAM IPHWNLDNIS AFPAASVFFR DVLLTIPFCF FSAVFIQVLN PMNIAYRKRE
PDRVLATRMA IRTHRISYIT LIAIILFFSF SFTFSISHEE AVSAFEQNIS ALALAAQVIP
GHIIHITSTI LNIFAVLTAF FGIYLGFHEA LKGIVLNVLS RIMDVKNVNP LLLTSGICVF
IVVTLVIWVS FRVSVLVFFQ LGSPLYGIVA CIIPFFLIYK VAQLEKLRGL KTWLILLYGI
LLCLSPLLKL IE