Gene SeSA_A3547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3547 
Symbol 
ID6517261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3421065 
End bp3421964 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content52% 
IMG OID642748533 
Producttartrate dehydratase subunit alpha 
Protein accessionYP_002116303 
Protein GI194735312 
COG category[C] Energy production and conversion 
COG ID[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 
TIGRFAM ID[TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.134648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA GTGAACAGAT ATCCCATATG ACCGACGTTA TGGCCAAGTT TGTGGGATAT 
ACCGGCAAAG TTTTGCCTGA TGATGTCACT GCAAAACTGG AAGATTTGCA TAAGAAAGAG
ACCAGTAAAC TGGCCGACGT CATCTTTACT ACCATGATTG AGAACCAGCG TCTGGCGAAA
GAGCTGGATC GACCTTCCTG CCAGGACACC GGTGTCATTC AGTTTCTGGT GGAGTGCGGG
ACGAACTTTC CGCTGATTGG CGAGCTGGAA GCGTTGTTGC GTGAGGCGGT GATCAAAGCA
ACTGTAGATT CTCCGCTGCG CCACAACAGC GTAGAAACTT TTGATGAATA CAACACCGGT
AAAAACGTGG GTAAAGGTAC GCCGACGGTC TTCTGGGAGA TCGTTCCCAA CTCCGATCAG
TGCAGCATTT ATACCTATAT GGCGGGCGGT GGTTGTTCTC TGCCGGGGAA AGCGATGGTG
CTGATGCCGG GTGCAGGCTA TGAAGGTGTG ACCCGCTTTG TACTGGATGT GATGACCAGC
TACGGCCTCA ACGCTTGTCC GCCGCTGCTG GTTGGCGTGG GCGTAGCGAC CTCTGTTGAA
ACGGCGGCAC TGCTATCGAA AAAAGCGCTG ATGCGTCCGA TCGGTTCGCA TAACGAGAAT
GAGCGTGCAG CCTCGCTGGA AAAAATGCTG GAAGACGGCA TTAACAAAAT TGGCCTGGGG
CCGCAGGGGA TGTCCGGTAA TACCTCCGTT ATGGGCGTGA ACATTGAAAA CACCGCGCGT
CATCCTTCTA CCATCGGCGT AGCGGTAAAC GTCGGCTGCT GGTCGCACCG TAAAGGGCAC
ATCGTTTTCG ATAAAGATTT GAATTACACC ATTACGTCTC ACAGCGGAGT GAATTTCTGA
 
Protein sequence
MSKSEQISHM TDVMAKFVGY TGKVLPDDVT AKLEDLHKKE TSKLADVIFT TMIENQRLAK 
ELDRPSCQDT GVIQFLVECG TNFPLIGELE ALLREAVIKA TVDSPLRHNS VETFDEYNTG
KNVGKGTPTV FWEIVPNSDQ CSIYTYMAGG GCSLPGKAMV LMPGAGYEGV TRFVLDVMTS
YGLNACPPLL VGVGVATSVE TAALLSKKAL MRPIGSHNEN ERAASLEKML EDGINKIGLG
PQGMSGNTSV MGVNIENTAR HPSTIGVAVN VGCWSHRKGH IVFDKDLNYT ITSHSGVNF