| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3543 |
|---|
| Symbol | |
|---|
| ID | 6515786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 3416950 |
|---|
| End bp | 3418251 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642748529 |
|---|
| Product | oxaloacetate decarboxylase beta chain |
|---|
| Protein accession | YP_002116299 |
|---|
| Protein GI | 194735917 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGTC TGAACGCCCT GCTTCAGGGC ATGGGGCTGA TGCACCTTGG CGCAGGCCAG
GCCATCATGC TGCTGGTCAG CCTGCTGCTG CTGTGGCTGG CGATTGCGAA AAAGTTCGAG
CCGCTGCTGC TGCTGCCGAT TGGCTTCGGC GGCCTGCTCT CCAACATCCC GGAAGCGGGC
ATGGCGCTGA CCGCGCTGGA AAGCCTGCTG GCCCACCACG ACGCCGGGCA GCTGGCGGGG
ATTGCCGCGA AGCTGAACTG CGCGCCGGAC GTGCACGCCA TTAAGGAAGC ATTAGCGCTG
GCGCTGCCGT CGGTGCAGGG CCAGATGGAG AACCTGGCGG TGGACATGGG CTACACGCCG
GGGGTGCTGG CGCTGTTCTA TAAAGTGGCG ATTGGCTCCG GCGTCGCGCC GCTGGTCATC
TTTATGGGCG TGGGCGCGAT GACCGACTTC GGCCCGCTGC TGGCCAACCC GCGCACCCTG
CTGCTCGGCG CGGCGGCGCA GTTCGGCATC TTCGCTACGG TGCTGGGGGC GCTGACGCTG
AACTACTTCG GCCTGATTTC CTTCACCCTG CCGCAGGCGG CGGCCATCGG CATTATCGGC
GGCGCGGACG GCCCGACGGC GATTTATCTG TCGGGCAAGC TGGCGCCGGA GCTGCTGGGA
GCCATTGCGG TGGCGGCGTA CTCGTATATG GCGCTGGTGC CGTTAATCCA GCCGCCGATT
ATGAAGGCGC TGACCACGGA GACTGAGCGC AAAATCCGCA TGGTGCAGCT GCGCACCGTC
AGCAAGCGGG AAAAAATCCT CTTCCCGGTG GTGTTGCTCA TGCTGGTGGC CCTGCTGCTG
CCGGACGCCG CGCCGCTGCT GGGGATGTTC TGCTTTGGCA ACCTGATGCG CGAAAGTGGC
GTGGTGGAGC GTCTGAGCGA CACGGTACAG AACGGGCTGA TTAATATCGT GACCATCTTC
CTCGGACTGT CGGTGGGCGC CAAGCTGGTC GCGGACAAGT TCCTGCAGCC GCAGACGCTG
GGCATTCTGC TGCTGGGGGT GATTGCCTTT GGTATCGGGA CGGCGGCCGG GGTGCTGATG
GCGAAGCTGC TGAACCTGTG CAGTAAGAAC AAAATCAACC CGCTTATCGG TTCGGCGGGG
GTGTCGGCGG TGCCGATGGC GGCCCGCGTA TCGAACAAGG TGGGGCTGGA GTCGGACGCA
CAGAACTTCC TGCTGATGCA CGCGATGGGC CCGAACGTGG CGGGGGTTAT CGGTTCGGCC
ATTGCGGCGG GCGTGATGCT CAAGTACGTG CTGGCGATGT AA
|
|---|
| Protein sequence | MESLNALLQG MGLMHLGAGQ AIMLLVSLLL LWLAIAKKFE PLLLLPIGFG GLLSNIPEAG
MALTALESLL AHHDAGQLAG IAAKLNCAPD VHAIKEALAL ALPSVQGQME NLAVDMGYTP
GVLALFYKVA IGSGVAPLVI FMGVGAMTDF GPLLANPRTL LLGAAAQFGI FATVLGALTL
NYFGLISFTL PQAAAIGIIG GADGPTAIYL SGKLAPELLG AIAVAAYSYM ALVPLIQPPI
MKALTTETER KIRMVQLRTV SKREKILFPV VLLMLVALLL PDAAPLLGMF CFGNLMRESG
VVERLSDTVQ NGLINIVTIF LGLSVGAKLV ADKFLQPQTL GILLLGVIAF GIGTAAGVLM
AKLLNLCSKN KINPLIGSAG VSAVPMAARV SNKVGLESDA QNFLLMHAMG PNVAGVIGSA
IAAGVMLKYV LAM
|
|---|
| |