Gene SeSA_A3534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3534 
SymbolsspB 
ID6516021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3409179 
End bp3409679 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content56% 
IMG OID642748520 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_002116290 
Protein GI194734168 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0546582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTGT CACAGTTGAC GCCGCGTCGT CCTTATCTGT TGCGTGCTTT CTACGAGTGG 
TTGCTGGATA ACCAGTTGAC TCCGCATCTG GTGGTGGATG TGATGCTGCC TGGCGTGCAT 
GTCCCTATGG AATATGCGCG TGATGGGCAA ATCGTCCTCA ATATTGCGCC GCGGGCGGTG 
GGTAATCTGG AGCTGTCTAA TGATGAAGTG CGTTTTAATG CGCGCTTCGG CGGCGTTCCC 
CGTCAGGTTT CTGTGCCTTT GGCTGCGGTG CTGGCGATTT ACGCCCGTGA AAACGGCGCA 
GGCACCATGT TTGAGCCTGA AGCCGCCTAT GATGAAGACG TTGTCAGCTT AAATGATGAT 
GACAATACCG CAGGCGCGGA AAGCGAGACC GTGATGTCCG TCATTGATGG CGATAAGCCC 
GACCACGATG ACGACAGTAG TCCTGATGAC GAGCCGCCTC CGCCGCGTGG CGGACGTCCG 
GCGCTACGCG TAGTAAAATA A
 
Protein sequence
MDLSQLTPRR PYLLRAFYEW LLDNQLTPHL VVDVMLPGVH VPMEYARDGQ IVLNIAPRAV 
GNLELSNDEV RFNARFGGVP RQVSVPLAAV LAIYARENGA GTMFEPEAAY DEDVVSLNDD 
DNTAGAESET VMSVIDGDKP DHDDDSSPDD EPPPPRGGRP ALRVVK