Gene SeSA_A3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3533 
Symbol 
ID6518768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3408279 
End bp3409007 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content52% 
IMG OID642748519 
Producttranscriptional regulator NanR 
Protein accessionYP_002116289 
Protein GI194734653 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.606366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCCGCC GTCCGCTGGC GCGTAAAAAA CTGTCTGAAA TGGTTGAGGA AGAGCTGGAG 
CAGATGATCC GCCGTCATGA GTTTGGCGAG GGAGAACAGC TACCGTCTGA ACGTGAATTA 
ATGGCCTTCT TCAATGTGGG ACGTCCCTCT GTGCGTGAAG CGTTAGCTGC GCTGAAGCGT 
AAAGGCTTGG TGCAAATCAA TAACGGCGAA CGCGCCCGCG TCTCGCGCCC CTCTGCTGAT 
ACCATCATCA GCGAACTGTC GGGTATGGCG AAAGATTTTC TTACTCATCC TGGCGGCATC 
GCTCACTTTG AACAGCTACG GCTTTTCTTT GAATCCAGCC TGGTACGCTA TGCGGCGGAA 
CATGCCACCG ACGAGCAGAT CGCGTTGTTA ACGAAAGCAC TGGAAATTAA TAGCCAGTCG 
CTGGATGACA ACGCGCTGTT TATTCGTTCG GATGTCGAGT TTCACCGGGT GCTGGCTGAA 
ATTCCCGGCA ATCCGATCTT TATGGCTATT CATGTTGCTC TGCTGGACTG GCTAATCGCC 
GCTCGCCCAA GCGTTCCCGA TCGTGAGCTG CATGAACATA ATAACTTGAG TTATCAACAG 
CATATTGTGA TTGTTGATGC CATTCGCCAG CGAGATCCCG ATAAAGCGGA TCGCGCTCTG 
CAAACCCACC TCAATAGCGT TTCCGCTACC TGGCACGCGC TCGGTAAAAA AAGTCAAAAA 
ATGCGGTAG
 
Protein sequence
MRRRPLARKK LSEMVEEELE QMIRRHEFGE GEQLPSEREL MAFFNVGRPS VREALAALKR 
KGLVQINNGE RARVSRPSAD TIISELSGMA KDFLTHPGGI AHFEQLRLFF ESSLVRYAAE 
HATDEQIALL TKALEINSQS LDDNALFIRS DVEFHRVLAE IPGNPIFMAI HVALLDWLIA 
ARPSVPDREL HEHNNLSYQQ HIVIVDAIRQ RDPDKADRAL QTHLNSVSAT WHALGKKSQK 
MR