Gene SeSA_A3494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3494 
Symbol 
ID6519490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3370538 
End bp3371503 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content53% 
IMG OID642748482 
Productputative transporter 
Protein accessionYP_002116252 
Protein GI194734771 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00919199 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGC AGGCAGGCAT TGGCATTCTT TTAGCGCTCA CTACCGCGAT GTGCTGGGGA 
GCGTTGCCAA TAGCAATGAA GCAAGTGCTG GAGGTGATGG AGCCTTCAAC CATTGTCTTC 
TACCGCTTCT TAATGGCCAG TATTGGCCTC GGGGCGATAC TGGCAGTAAA AAGAAAGCTG 
CCGCCGCTGC GTATTTTTCG TAAGCCGCGC TGGTTGGTGT TATTAGCGAT AGCGACCTGC 
GGACTGTTCG GTAATTTCAT TTTGTTCAGT TCTTCCCTGC AATATTTAAG CCCAACCGCG 
TCGCAGGTTA TCGGCCAGCT CTCGCCGGTT GGCATGATGG TCGCCAGCGT CTTTATTCTG 
AAAGAAAAGA TGCGCGGTAC GCAGGTGATT GGCGCGCTGA TGTTATTGAG CGGGCTGGTG 
ATGTTTTTTA ACACCAGTCT GATCGAGATT TTTACCCGAC TGACCGACTA CACCTGGGGC 
GTTATTTTTG GCGTAGGCGC GGCGATGGTG TGGGTGAGCT ATGGCGTGGC GCAAAAAGTA 
TTATTGCGAC GTCTGGCCTC GCAGCAGATC CTGTTTTTAC TGTACACTTT ATGTACGATA 
GCGCTCTTGC CGCTGGCAAA ACCGATGGTG ATAGCGCAAC TGAGCGACTG GCAGCTCGCC 
TGTTTGATTT TCTGCGGGCT AAATACGCTG GTAGGATATG GCGCCCTGGC GGAAGCGATG 
GCGCGTTGGC AGGCGGCGCA GGTGAGTGCG ATAATCACGC TTACACCGCT ATTTACCCTG 
CTGTTTTCAG ATCTTTTATC TATGGCCTGG CCCGATTTCT TCGCCAGACC GATGTTAAAC 
CTTTTAGGTT ATCTCGGTGC GTTTGTCGTG GTTGCGGGCG CGATGTATTC CGCCATTGGT 
CATCGTATTT GGGGCGGTTT ACGCAAGCAT GAAACGGTGG TTTCGCAACC CCGCTCAGGC 
GAATGA
 
Protein sequence
MKQQAGIGIL LALTTAMCWG ALPIAMKQVL EVMEPSTIVF YRFLMASIGL GAILAVKRKL 
PPLRIFRKPR WLVLLAIATC GLFGNFILFS SSLQYLSPTA SQVIGQLSPV GMMVASVFIL 
KEKMRGTQVI GALMLLSGLV MFFNTSLIEI FTRLTDYTWG VIFGVGAAMV WVSYGVAQKV 
LLRRLASQQI LFLLYTLCTI ALLPLAKPMV IAQLSDWQLA CLIFCGLNTL VGYGALAEAM 
ARWQAAQVSA IITLTPLFTL LFSDLLSMAW PDFFARPMLN LLGYLGAFVV VAGAMYSAIG 
HRIWGGLRKH ETVVSQPRSG E