Gene SeSA_A3453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3453 
Symbol 
ID6516421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3335169 
End bp3337211 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content59% 
IMG OID642748444 
ProductLppC superfamily 
Protein accessionYP_002116216 
Protein GI194736652 
COG category[R] General function prediction only 
COG ID[COG3107] Putative lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACCCT CAACATTTTC TCGTTTGAAC GCCGCGCGCG CGCTGCCTGT CGTCCTGGCT 
GCGCTACTTT TCGCCGGGTG CGGCACCCAG GCGCCAGATC AAAGCGCAGC CTATATGCAG
GGTTCAGCGC AAGCTGACTC CGCCTTTTAC CTGCATCAGA TGCAGCAAAG CGCAGATGAT
AGCAAGACCA ACTGGCAATT ACTCGCCATT CATGCACTGC TGAAAGAAGG AAAAAGCCAG
CAGGCCGTCG ACCTGTTCAA CCAACTCCCG CAAAATCTGA ATGATGCCCA GCGTCGCGAA
CAGTCTTTAT TAGCGGTAGA AATCAAACTG GCGCAAAAAG ATGTCGCAGG CGCGCAGGCC
TTGCTGGATA AACTAAAACC CGCCGACTTT GCGCCACATC AGCAAGCGCG TTACTGGCAG
GCGCAGATCG TTGCCAGCCA GGGACGCCCG TCGCTTACCC TATTGCGGGC GTTAATCGCC
CAGGAACCGC TACTGGCGGC GAAAGAGAAA CAAAAAAATA TCGACGCCAC CTGGCAGGCG
CTCTCCGCCA TGACGCCGGA TCAGGCCAGG ACGCTGGTTA TCAACGCCGA TGAAAATGTG
CTTCAGGGCT GGCTGGATCT GCAACGCGTC TGGTTTGACA ACCGCAACGA TCCGGACATG
CTGAAAGCCG GGATCGCCGA CTGGCGAAAA CGCTACCCGC AAAATCCGGG GGCGAAAATG
CTGCCGACGC AGCTCGTCAA TGTACAACGT TTTAAACCAG CTTCCACCAG CAAAATCGCT
CTGCTGCTGC CGCTGAACGG TCAGGCTGCC GTGTTTGGCC GTACCATCCA GCAAGGTTTC
GAAGCCGCGA AAAACCTCGG CACCCAGGCG GTGGAAATGC AGCCTGCCGC CGCGCCTGAC
GCGCCGGTCG AACCTGGCGT GGAGGAGACG CAACCACAAA TGACCAACGG CGTCGCCAGT
CCGTCGCAGG CCTCGGTGAG CGATCTGACT GATGACGCTC CATCCCAGTC CGCTACGCCA
GTCAGCGCGC CACAAACTCC CCCTGCTACA GCAAGCGCGC CGGCGGATCC CTCCGCTGAA
TTAAAAATCT ACGATACCTC TTCCCAGCCG TTGGATCAGG TGCTCGCTCA GGTTCAGCAA
GACGGCGCCA GTATCGTGGT CGGGCCGCTG TTGAAAAACA ATGTGGAAGC GCTGATGAAA
AGCAACACGC CGCTCAACGT GCTGGCGCTC AACCAGCCGG AAACTGTACG TAGCTTCCCT
AATATCTGCT ATTTCGCGCT CTCTCCTGAA GATGAAGCCC GTGACGCGGC GCATCATATT
TATGACCAGG GCAAGCAGTC GCCGCTGCTG TTGATCCCAC GCAGCGCGCT TGGCGATCGC
GTGGCGAACG CCTTCACCCA GGAGTGGCAA AAACTGGGCG GCGGCATCGT GTTACAGCAA
AAATTCGGCT CCGTAGCCGA GCTGAAAATG GGCGTGAACG GCGGCGCGGG TATCGCGTTG
ACGGGCAGTC CGGTCGCCGC CAGCGTGCCT GCGCAGCCTG GCGTCACCAT TGGCGGTCTG
ACCATCCCTG CGCCGCCGAC CGACGCGCAA ATCACCGGCG GCGGACGCGT AGACGCGGTC
TATATTCTGG CTACGCCGGA AGAGATTGGC TTTATCAAAC CGATGATCGC CATGCGTAAC
GGCACCCAGA GCGGCGCGAC GCTGTATGCC AGCTCCCGTA GCGCGCAAGG CACCTCCGGC
CCCGACTTCC GTCTGGAGAT GGAAGGTTTA CAATACAGTG AAATTCCTAT GCTGGCAGGC
GGCAATATGC CGTTGATGCA GCAGGCGCTG AGCGCTGTAC ATAACGACTA TTCTCTGGCG
CGGATGTACG CCATGGGCGT GGATGCCTGG ACGCTGGCGA ACCACTTTTC GCAGATGCGT
CAGGTGCAGG GGTTTGAGAT CAATGGTAAT ACCGGCGCAT TAACTGCCAG CCCGGATTGT
GTGATTAACA GGAAGTTATC ATGGCTCAAA TACCAGCAAG GGGAGATTGT TCCCGCCAGC
TAA
 
Protein sequence
MVPSTFSRLN AARALPVVLA ALLFAGCGTQ APDQSAAYMQ GSAQADSAFY LHQMQQSADD 
SKTNWQLLAI HALLKEGKSQ QAVDLFNQLP QNLNDAQRRE QSLLAVEIKL AQKDVAGAQA
LLDKLKPADF APHQQARYWQ AQIVASQGRP SLTLLRALIA QEPLLAAKEK QKNIDATWQA
LSAMTPDQAR TLVINADENV LQGWLDLQRV WFDNRNDPDM LKAGIADWRK RYPQNPGAKM
LPTQLVNVQR FKPASTSKIA LLLPLNGQAA VFGRTIQQGF EAAKNLGTQA VEMQPAAAPD
APVEPGVEET QPQMTNGVAS PSQASVSDLT DDAPSQSATP VSAPQTPPAT ASAPADPSAE
LKIYDTSSQP LDQVLAQVQQ DGASIVVGPL LKNNVEALMK SNTPLNVLAL NQPETVRSFP
NICYFALSPE DEARDAAHHI YDQGKQSPLL LIPRSALGDR VANAFTQEWQ KLGGGIVLQQ
KFGSVAELKM GVNGGAGIAL TGSPVAASVP AQPGVTIGGL TIPAPPTDAQ ITGGGRVDAV
YILATPEEIG FIKPMIAMRN GTQSGATLYA SSRSAQGTSG PDFRLEMEGL QYSEIPMLAG
GNMPLMQQAL SAVHNDYSLA RMYAMGVDAW TLANHFSQMR QVQGFEINGN TGALTASPDC
VINRKLSWLK YQQGEIVPAS