Gene SeSA_A3414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3414 
Symbol 
ID6519746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3298496 
End bp3299530 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content53% 
IMG OID642748408 
Productputative oxidoreductase YgjR 
Protein accessionYP_002116180 
Protein GI194737708 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGAAAA TCCCTTTCTG GAGTCCGCTG ACGTTTATGA TACGTTTCGC TGTAATTGGG 
ACTAACTGGA TCACGCGCCA GTTTGTCGAC GCCGCCCATG AAACCGGCAA ATTCAGGCTC 
GCCGCCGTTT ACTCCCGTAG TCTTGAACAG GCGCAGTCTT TCGCAAATGA TTATCCCGTC 
GAGCATCTGT TTACCTCGCT GGAAGCGATG GCGCAAAGCG ACGCGATTGA GGCGGTTTAT 
ATCGCCAGCC CGAACTCCCT GCATTTCTCC CAGACACAGC GCTTTTTGCA GCATAAAAAA 
CATGTCATGT GCGAAAAGCC GCTGGCTTCT AACCTGGCGG AGGTTGATGC CGCTATCGCC 
TGCGCGCGCG ATAACCAGCG GGTACTGTTT GAAGCCTTTA AAACCGCCTG CCTGCCCAAT 
TTCCTGCTGC TGCGGGAATC GTTGCCGAAA ATCGGCAGAA TGCATAAAGC ATTCCTAAAT 
TACTGCCAGT ACTCTTCACG TTATCAGCGC TATCTGAACG GTGAAAATCC GAATACGTTT 
AATCCGGCCT TCTCCAATGG TTCGATTATG GATATCGGGT ATTACTGTCT GGCGTCGGCG 
ATCGCGCTAT GGGGCGAGCC GCGCAGCGTT CAGGCGTCGG CGAATTTGTT GGAAAGCGGA 
GTAGATGCGC ACGGCGTCGT GGTTATGGAT TACGGCGATT TTAGCGTCAC GCTACAGCAT 
TCCAAAGTCA GCGACTCGGT ACTGGCCAGT GAAATTCAGG GCGAGAGGGG ATCGCTGGTC 
ATTGAAAAGC TGTCGGAATG CCAGAAAGTG TGTTTTGCGC CGCGCGGCGC GCTGATGCAG 
GATCTGACCC AGCCTCAGCA TATTAATACC ATGCTGTATG AAGCCGGGGC GTTTGCCCAG 
CTTATTGAAA ACCATACCGT GGAACATCCG GGGTTATCGC TAAGTCGCGC CACGGCAAAA 
TGGCTGACAG AAATACGCCG TCAAACCGGG GTCATCTTCC CGGCGGACGA TCTGACTCAT 
CCCCTTACTG CGTAA
 
Protein sequence
MTKIPFWSPL TFMIRFAVIG TNWITRQFVD AAHETGKFRL AAVYSRSLEQ AQSFANDYPV 
EHLFTSLEAM AQSDAIEAVY IASPNSLHFS QTQRFLQHKK HVMCEKPLAS NLAEVDAAIA 
CARDNQRVLF EAFKTACLPN FLLLRESLPK IGRMHKAFLN YCQYSSRYQR YLNGENPNTF 
NPAFSNGSIM DIGYYCLASA IALWGEPRSV QASANLLESG VDAHGVVVMD YGDFSVTLQH 
SKVSDSVLAS EIQGERGSLV IEKLSECQKV CFAPRGALMQ DLTQPQHINT MLYEAGAFAQ 
LIENHTVEHP GLSLSRATAK WLTEIRRQTG VIFPADDLTH PLTA