| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3198 |
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| Symbol | |
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| ID | 6516556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 3092733 |
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| End bp | 3095222 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642748206 |
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| Product | fimbrial usher protein |
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| Protein accession | YP_002115981 |
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| Protein GI | 194734483 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTA CCCGGCTTGC CATTCTGATT ACCCTGACAT TTTCCGTCCT GAAGTCGCAG
GCCACGGAGT TCAATGCCAG CCTGCTGGAC AGCGGGAACC TGTCTAAGGT GGACCTCACG
GCCTTCAGCC GCGAGGGGTA TGTGGCGCCC GGTAACTATA TTCTCGATAT CTGGCTCAAT
GACCAGCCGG TACGGGAACA GTATCCGGTC AGAGTTGTAC CGGTTGCCGG ACGCGACGCG
GCCGTCATCT GTGTGACAAC AGACATGGTG GCCATGCTGG GTCTTAAGGA TAAGATTATT
CATGGCCTGA AACCCGTTAC CGGTATCCCG GACGGGCAAT GCCTTGAGCT GCGCTCCGCT
GACAGTCAGG TACGGTACAG CGCTGAAAAT CAGCGTCTGA CCTTCATTAT TCCCCAGGCC
TGGATGCGAT ATCAGGACCC GGACTGGGTC CCCCCTTCAC GCTGGAGCGA CGGCGTCACC
GCCGGCCTGC TCGATTACAA CCTGATGGTC AACCGCTATA TGCCGCAGCA GGGGGAAACC
TCTACCAGCT ACAGCCTCTA CGGCACCGCC GGGTTTAATC TCGGCGCCTG GCGGTTGCGG
AGCGATTACC AGTACAGCCG TTTTGACAGT GGGCAGGGCG CATCACAGTC CGATTTTTAT
CTGCCGCAGA CGTATCTGTT CCGTGCCCTG CCAGCACTGC GCTCAAAACT GACGCTCGGA
CAGACGTACC TCAGCTCCGC TATTTTTGAC TCCTTCCGCT TTGCCGGGCT CACTTTGGCC
AGCGATGAGC GCATGCTGCC ACCCTCTCTT CAGGGGTATG CCCCGAAAAT CAGCGGCATT
GCGAACAGTA ATGCACAGGT TACCGTCAGC CAGAATGGTC GCATTCTGTA CCAGACCCGG
GTGTCGCCGG GGCCTTTTGA GCTTCCCGAC CTGAGCCAGA ATATCAGCGG CAACCTGGAT
GTCAGCGTCC GGGAAAGCGA CGGTAGCGTC CGGACCTGGC AGGTCAACAC GGCCAGCGTC
CCCTTTATGG CACGCCAGGG ACAGGTTCGC TATAAGGTGG CCGCCGGACG TCCGCTGTAC
GGCGGGACGC ATAACAACAG CACGGTCAGC CCTGACTTTC TGCTCGGGGA GGCCACCTGG
GGAGCATTTA ACAACACGTC GCTGTATGGC GGCCTCATTG CCTCCACCGG CGACTACCAG
TCCGCGGCGC TCGGGATCGG CCAGAATATG GGGCTGCTGG GCGCTCTGTC TGCGGACGTC
ACCCGCTCAG ATGCGCGGTT GCCGCATGGG CAGAAGCAGT CCGGTTACAG CTACCGTATC
AACTATGCCA AAACGTTTGA TAAAACCGGC AGTACCCTGG CGTTCGTCGG ATACCGCTTC
TCGGACCGCC ATTTTCTGTC CATGCCGGAG TACCTGCAGC GTCGGGCCAC CGACGGCGGC
GATGCATGGC ATGAAAAACA GAGCTACACC GTGACTTATA GCCAGTCCGT TCCGGTACTC
AATATGAGCG CTGCCCTCTC GGTAAGCCGG CTCAATTACT GGAATGCGCA GTCCAACAAT
AACTACATGC TCAGCTTCAA CAAAGTGTTC AGTCTCGGCG ACCTTCAGGG GCTCTCGGCC
TCGGTGTCGT TTGCCCGTAA CCAGTACACC GGCGGGGGGA GCCAGAACCA GGTCTACGCC
ACCATCAGTA TCCCGTGGGG CGACAGCCGC CAGGTGAGTT ACAGCGTACA GAAAGATAAC
CGGGGCGGCC TGCAGCAGAC CGTGAATTAC AGCGATTTCC ATAACCCGGA CACCACATGG
AACATCAGCG CCGGTCATAA CCGCTATGAC ACCGGCAGTA ACAGCAGCTT CAGCGGCAGC
GTGCAGAGCC GTCTGCCGTG GGGCCAGGCG GCAGCGGACG CCACCCTGCA GCCCGGGCAG
TACCGCAGCC TGGGCCTGAG CTGGTACGGC TCGGTGACCG CCACCGCCCA CGGCGCCGCC
TTCAGCCAGT CGATGGCCGG GAATGAGCCT CGCATGATGA TAGATACCGG AGACGTGGCC
GGTGTACCGG TGAACGGCAA CAGCGGGGTG ACCAACCGCT TCGGGGTGGG CGTGGTGAGC
GCCGGCAGCA GCTATCGGCG CAGCGATATT TCGGTTGATG TGGCCGCCCT GCCGGAGGAC
GTGGACGTCA GCAGCTCCGT CATCAGCCAG GTGCTGACGG AGGGCGCGGT GGGCTACCGG
AAGATTGACG CCAGCCAGGG GGAGCAGGTG CTCGGTCATA TCCGGCTGGC TGATGGCGCC
AGTCCACCGT TTGGCGCTCT GGTAGTGTCC GGGAAAAGCG GCAGAACCGC GGGGATGGTC
GGAGATGACG GTCTGGCCTA CCTGACAGGC CTCAGCGGGG AAGACCGCCG GACCCTGAAC
GTGTCCTGGG ATGGCCGGGT GCAGTGCAGA CTCACCCTGC CGGAAACGGT GACACTCAGT
CGGGGGCCGC TGTTACTGCC CTGCAGATAA
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| Protein sequence | MKITRLAILI TLTFSVLKSQ ATEFNASLLD SGNLSKVDLT AFSREGYVAP GNYILDIWLN
DQPVREQYPV RVVPVAGRDA AVICVTTDMV AMLGLKDKII HGLKPVTGIP DGQCLELRSA
DSQVRYSAEN QRLTFIIPQA WMRYQDPDWV PPSRWSDGVT AGLLDYNLMV NRYMPQQGET
STSYSLYGTA GFNLGAWRLR SDYQYSRFDS GQGASQSDFY LPQTYLFRAL PALRSKLTLG
QTYLSSAIFD SFRFAGLTLA SDERMLPPSL QGYAPKISGI ANSNAQVTVS QNGRILYQTR
VSPGPFELPD LSQNISGNLD VSVRESDGSV RTWQVNTASV PFMARQGQVR YKVAAGRPLY
GGTHNNSTVS PDFLLGEATW GAFNNTSLYG GLIASTGDYQ SAALGIGQNM GLLGALSADV
TRSDARLPHG QKQSGYSYRI NYAKTFDKTG STLAFVGYRF SDRHFLSMPE YLQRRATDGG
DAWHEKQSYT VTYSQSVPVL NMSAALSVSR LNYWNAQSNN NYMLSFNKVF SLGDLQGLSA
SVSFARNQYT GGGSQNQVYA TISIPWGDSR QVSYSVQKDN RGGLQQTVNY SDFHNPDTTW
NISAGHNRYD TGSNSSFSGS VQSRLPWGQA AADATLQPGQ YRSLGLSWYG SVTATAHGAA
FSQSMAGNEP RMMIDTGDVA GVPVNGNSGV TNRFGVGVVS AGSSYRRSDI SVDVAALPED
VDVSSSVISQ VLTEGAVGYR KIDASQGEQV LGHIRLADGA SPPFGALVVS GKSGRTAGMV
GDDGLAYLTG LSGEDRRTLN VSWDGRVQCR LTLPETVTLS RGPLLLPCR
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