Gene SeSA_A3182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3182 
Symbol 
ID6519501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3078351 
End bp3079286 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content58% 
IMG OID642748191 
ProductDNA-binding transcriptional regulator LysR 
Protein accessionYP_002115966 
Protein GI194737023 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCCG TTAATTTACG TCACATTGAA ATTTTTCATG CCGTAATGAC CGCCGGAAAT 
CTCACCGAAG CGGCGCGGCT GCTGCATACC TCGCAGCCTA CCGTCAGTCG CGAGCTGGCG 
CGTTTTGAGA AAGTGCTGGG ATTAACGCTG TTTGAGCGCA CACGCGGGCG CTTACATCCG 
ACGGTGCAAG GGCTACGCCT GTTCGAAGAG GTACAACGCT CCTGGTATGG GTTGGATCGT 
ATCGTCAGCG CGGCGGAAAG TCTGCGCGAG TTCCGTCAGG GCGAACTCTC TATCGCCTGC 
CTGCCGGTCT TTTCACAATC CTTTTTGCCG CCGCTACTAC CGCCTTTTCT GGCGCGTTAT 
CCGGATGTCA GCCTGAATAT TGTGCCGCAG GAGTCGCCGT TGCTGGAAGA GTGGCTCTCC 
GCTCAGCGCC ACGATTTAGG GCTGACGGAG ACGCTTCATG CCCCGGCAGG AACAACCCGT 
ACCGAGTTAC TAACGCTAAA TGAAGTGTGC GTACTGCCCT GCGACCATCC GCTTACCGCC 
AAAACGGTAC TGACGCCAGA CGATTTTCAG GGGGAAAACT TTATCAGCCT CTCCCGCCTG 
GACAGCTATC GACAGTTGTT GGATACGTTA TTTGCCGAAC ATCAGGTGAA GCGCAGAATG 
GTGGTGGAAA CGCATAGCGC GGCCTCCGTC TGCGCGATGG TGCGCGCCGG AGCGGGCGTT 
TCGATCGTTA ACCCGCTGAC CGCGCTGGAC TATGCCGCCA GCAGCGTCAC CGTTCGCCGC 
TTCAGCATTG ACGTGCCCTT TACCGTCAGC CTGATTCGCC CGCTACACCG CCCCGCCTCC 
GCGCTGGTTG ACGCCTTCAG TAAGCATTTA CAAACGCATC TTTCGCGCCT GGTCGAACCG 
CTGGAGGTTA TTCTGGGGCC GATGACGAAA GCATAA
 
Protein sequence
MAAVNLRHIE IFHAVMTAGN LTEAARLLHT SQPTVSRELA RFEKVLGLTL FERTRGRLHP 
TVQGLRLFEE VQRSWYGLDR IVSAAESLRE FRQGELSIAC LPVFSQSFLP PLLPPFLARY 
PDVSLNIVPQ ESPLLEEWLS AQRHDLGLTE TLHAPAGTTR TELLTLNEVC VLPCDHPLTA 
KTVLTPDDFQ GENFISLSRL DSYRQLLDTL FAEHQVKRRM VVETHSAASV CAMVRAGAGV 
SIVNPLTALD YAASSVTVRR FSIDVPFTVS LIRPLHRPAS ALVDAFSKHL QTHLSRLVEP 
LEVILGPMTK A