Gene SeSA_A3061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3061 
Symbol 
ID6516022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2958616 
End bp2959824 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content54% 
IMG OID642748083 
Productmajor facilitator family transporter 
Protein accessionYP_002115860 
Protein GI194735247 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.586579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTATC GCAGTAAAGT GGCAGTGGTT TACCTGCTCG GCTTCTTTCT TGATCTGATT 
AATCTGTTTA TTGCCAGCGT GGCTTTTCCT GCGATGTCCG TGGATCTGCA TACGTCCATA 
TCGGCGCTGG CATGGGTGAG TAATGGTTAT ATCGCAGGAT TAACGCTGAT CGTTCCGTTT 
AGCGCGTTTC TTTCGCGTTA TCTCGGCGCT CGACGGCTGA TCATATTTTC GCTCATCCTG 
TTTAGCGTTG CCGCCGCTGC CGCAGGTTTT GCCGATTCCT TACACAGCCT TGTTTTCTGG 
CGTATTGTGC AGGGGACGGG CGGTGGCTTA TTGATCCCGG TTGGTCAGGC GTTAACCTGG 
CAACAGTTTA AACCGCATGA ACGCGCTGGC GTGTCATCGG TTGTCATGAT GGTGGCGCTA 
CTGGCGCCGG CATGTTCGCC TGCGATTGGT GGGCTGCTGG TGGAAACGTG CGGCTGGCGC 
TGGATATTCT TTGCCACGCT GCCGGTGGCC GTTCTCACCT TATTGCTCGC TTATCGTTGG 
CTGAACGTCG CGTCGACGAC AATGGCGTCA GCAAGATTAC TCCATCTGCC GTTGTTGACG 
GACAGGCTGC TGCGTTTTGC CATGATCGTC TATCTGTGTG TGCCGGGTAT GTTCATTGGT 
ATCAGCGTGG TCGGGATGTT TTATCTACAG AACGTCGCGC AGCTATCGCC TGCGGCGGCG 
GGGTCGCTGA TGCTTCCCTG GTCGATCGCT TCATTTGTCG CCATTATGCT TACCGGACGT 
TACTTCAATC GGCTTGGGCC GCGTCCGCTG ATTATCGTCG GCTGTCTTCT TCAGGCAGCA 
GGGATACTGC TTTTAACTAA CGTTACGCCT GCGACATCGC ACCGTGTACT GATGATGATA 
TTCGCCTTAA TGGGCGCTGG CGGCAGTTTG TGCAGCAGTA CCGCGCAGAG TGGCGCTTTC 
CTGACTATTG CTCGCCGGGA CATGCCTGAC GCCAGCGCGC TATGGAATCT TAATCGTCAG 
ATCAGCTTTT TCCTTGGCGC GACGCTGTTG ACGCTGCTGT TAAACGCGCT CCAGCGCGTT 
ATGTTGCTTG AGGTTGCTTA TCGCTGGACC TTTATTGCCG CCGCCGGTAT CACCCTGCTG 
CCCCTTATTT ACGCTGTCTG TCTAAACAAT AGACAGGCGC TTCTGTGCCT GAAAAAGGAA 
AGATCATGA
 
Protein sequence
MTYRSKVAVV YLLGFFLDLI NLFIASVAFP AMSVDLHTSI SALAWVSNGY IAGLTLIVPF 
SAFLSRYLGA RRLIIFSLIL FSVAAAAAGF ADSLHSLVFW RIVQGTGGGL LIPVGQALTW 
QQFKPHERAG VSSVVMMVAL LAPACSPAIG GLLVETCGWR WIFFATLPVA VLTLLLAYRW 
LNVASTTMAS ARLLHLPLLT DRLLRFAMIV YLCVPGMFIG ISVVGMFYLQ NVAQLSPAAA 
GSLMLPWSIA SFVAIMLTGR YFNRLGPRPL IIVGCLLQAA GILLLTNVTP ATSHRVLMMI 
FALMGAGGSL CSSTAQSGAF LTIARRDMPD ASALWNLNRQ ISFFLGATLL TLLLNALQRV 
MLLEVAYRWT FIAAAGITLL PLIYAVCLNN RQALLCLKKE RS