Gene SeSA_A3026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3026 
SymboleprI 
ID6518617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2923281 
End bp2923523 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content46% 
IMG OID642748049 
Producttype III secretion apparatus needle protein 
Protein accessionYP_002115826 
Protein GI194734064 
COG category 
COG ID 
TIGRFAM ID[TIGR02105] type III secretion apparatus needle protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.504862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00772471 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACAC CTTGGTCAGG CTATCTGGAT GACGTCTCAG CAAAATTTGA TACGGGCGTT 
GATAATCTAC AAACGCAGGT AACAGAGGCG CTGGATAAAT TAGCAGCAAA ACCCTCCGAT 
CCGGCGCTAC TGGCGGCGTA TCAGAGTAAG CTCTCGGAAT ATAACTTGTA CCGTAACGCG 
CAATCGAACA CGGTAAAAGT CTTTAAGGAT ATTGATGCTG CCATTATTCA GAACTTCCGT 
TAA
 
Protein sequence
MATPWSGYLD DVSAKFDTGV DNLQTQVTEA LDKLAAKPSD PALLAAYQSK LSEYNLYRNA 
QSNTVKVFKD IDAAIIQNFR