| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2792 |
|---|
| Symbol | |
|---|
| ID | 6517211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 2690439 |
|---|
| End bp | 2691425 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642747829 |
|---|
| Product | high-affinity nickel-transporter |
|---|
| Protein accession | YP_002115614 |
|---|
| Protein GI | 194735065 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTAA TTTTTTCTCA ACGCACTCCG GGGCGGCGCT GGCTCTCGCT GTGGCCATTG
GCGTTATTCC TGCTGCTAAT GCTGGTTGGC GGTCTGTGGA TATGGCAGGC CTGGCCGCAG
GTGATGTTGA AAAGCGCTCT TTGGCAGCGG GACGTGAATC AGCAGTTGAG CGCGCTGCTT
AACGCGGTGG CGACGCATCC TGAGCGGGCG GGCGGATCGT TGCTTCTGCT GAGTTTTATG
TATGGCGTGC TTCATGCGCT GGGGCCGGGA CACGGCAAAG TGGTGATCGC GACATGGCTG
GCGACGCATC CTTCGAAGCT GAAATCAAGT ATCGTGCTAA CCCTCGCCGC CGCGTTATTA
CAGGGGCTCG TGGCTATCGG GTTGGTGGTG GGCGTGCTGA CCGTATTGCA ACTTCCGGCC
AGGCAGCTCC ATCTGAGCGG TTTCTGGCTG GAAAAGGGGA GCTATGCGTT AGTTGGCGGG
CTGGGCATCT TGCTGTGCTG GCGGGCGATA AAAAGGTTAC GCGCGCTGCT ACGTAAACCT
GTCTTTATCG CTTTTACGCC GCGCCATGTT CACCATGAAA AATGCGGCTG CGGACATCAG
CATCTACCGA CGCAGGAACA ATTGCATAGC GGCGATGACT GGCGCGCGCG ACTCATGATC
GTACTGTCTA TGGGGATGCG GCCCTGTTCC GGCGCGATAA TGGTGCTGTT ATTCAGTAAA
GTGATTGGCG TTTTTAGCTG GGGAATGGCG TCGGTACTGG CAATGGCGGC GGGAACCTCG
CTAACGATTA CCTCGCTGGC GCTGCTGGTA CACACTTTTC GTGCTCTGGC GGTGAAGCTC
AGTGGAAACG AAGCGCCGGC GTTATGGCGG CAGGTAGGCT GGTCAACGCT GGCGCTGGCC
GGAGGGGTGA TACTGCTTGT CGCGGCGCTG GTCATGTGGT TTAGCGTGCC GCAGCCTGTG
GGCGGGCTGC GGCCATGGCG TGGTTGA
|
|---|
| Protein sequence | MSVIFSQRTP GRRWLSLWPL ALFLLLMLVG GLWIWQAWPQ VMLKSALWQR DVNQQLSALL
NAVATHPERA GGSLLLLSFM YGVLHALGPG HGKVVIATWL ATHPSKLKSS IVLTLAAALL
QGLVAIGLVV GVLTVLQLPA RQLHLSGFWL EKGSYALVGG LGILLCWRAI KRLRALLRKP
VFIAFTPRHV HHEKCGCGHQ HLPTQEQLHS GDDWRARLMI VLSMGMRPCS GAIMVLLFSK
VIGVFSWGMA SVLAMAAGTS LTITSLALLV HTFRALAVKL SGNEAPALWR QVGWSTLALA
GGVILLVAAL VMWFSVPQPV GGLRPWRG
|
|---|
| |