Gene SeSA_A2570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2570 
Symbol 
ID6517428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2457194 
End bp2458024 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content56% 
IMG OID642747619 
Producttransketolase domain protein 
Protein accessionYP_002115411 
Protein GI194735363 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3959] Transketolase, N-terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.479984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.537174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTAA CCGAAATCAC CCAACTGGCG CGCGACATTC GCGTCGCCAC GCTCAAATCC 
TTAAACCATC TTGGCTTTGG TCACTATGGC GGCAGCATGT CGGTAGTGGA AACTCTGGCG 
GTTCTGTACG GCGCGGTGAT GAAAATCGAC CCTGCCGACC CGGACTGGCC GGAACGCGAT 
TACTTCGTAC TGTCGAAAGG CCATGCGGGC CCCGCGTTGT ACAGTACCCT GGCGATTAAA 
GGCTATTTCC CGCGCGAAGA GCTGAATACG CTTAACCAGA ACGGCACCCG TCTTCCCAGC 
CATCCGGATC GGCTAAAAAC GCGCGGCGTG GACGCCACGA CCGGCTCACT GGGACAGGGC 
ATCTCTATTG CTGGCGGTAT GGCGCTGTCG CATAAACTGG CGCGGCGACC CAACCGGGTA 
TTTTGCATTG TCGGCGATGG CGAGCTCAAT GAAGGGCAGT GCTGGGAGGC GTTTCAGTTT 
ATTGCCCACC ACCGCCTGAA TAATCTGACC GTTTTCATTG ACTGGAATAA ACAGCAGCTT 
GACGGCGAGC TGGAGGAGAT TATCAATCCG TTCGATCTGG AAGGGAAATT CCGCGCGTTT 
GATTTCGATG TCGTCACCGT CAAAGGCGAT GATATCGCCG GACTACTGGC GGTGGTTCAG 
CCAGTGCCGC CCGCTGATGC CCGACCAAGG GTAGTGATCC TTGACAGCAT TAAAGGGCAG 
GGGGTGCCAT GCCTGGAGCA GTTAACGAAT TCTCACCACT TACGCCTGAC GGATGGCATG 
AAGCAGACGC TCAATGAGGC CATTCATCAA CTGGAGGTCA TGCATGATTA A
 
Protein sequence
MNVTEITQLA RDIRVATLKS LNHLGFGHYG GSMSVVETLA VLYGAVMKID PADPDWPERD 
YFVLSKGHAG PALYSTLAIK GYFPREELNT LNQNGTRLPS HPDRLKTRGV DATTGSLGQG 
ISIAGGMALS HKLARRPNRV FCIVGDGELN EGQCWEAFQF IAHHRLNNLT VFIDWNKQQL 
DGELEEIINP FDLEGKFRAF DFDVVTVKGD DIAGLLAVVQ PVPPADARPR VVILDSIKGQ 
GVPCLEQLTN SHHLRLTDGM KQTLNEAIHQ LEVMHD