Gene SeSA_A2403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2403 
Symbol 
ID6517992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2280541 
End bp2281458 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content55% 
IMG OID642747461 
Productamine ABC transporter periplasmic amine-binding protein 
Protein accessionYP_002115254 
Protein GI194738120 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.113306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCT CAAAGCTATG GGTAAGTTCG CTGGCGTTGC TGGCGACGGT GAGTTTACCT 
CTACAGGCGG CATCGCCCGT GACGGTCGGG TCAAAGATTG ATACCGAAGG CGCGCTGCTC
GGCAACATGA TTTTGCAGGT ACTGGAAAGC CACGGCGTTA AAACGGTCAA TAAAATTCAG
CTCGGGACCA CGCCAGTCGT TCGTGGCGCG ATTACCGCCG GAGAGCTGGA TATCTATCCG
GAATACACCG GTAACGGGGC GTTCTTTTTT AAAGATGAAA ACGATCCGGC ATGGAAGAAT
GCAAAGCAAG GCTTTGAGAA AGTCAAAAAA CTGGATGCGG AGCAGAATAA GCTGGTCTGG
TTGATGCCTG CGCCGGCAAA TAACACCTGG ACCATCGCGG TACGCCAGGA CATCGCGGAA
AAAAATAAAC TCTCCTCGCT TGCCGATCTC AGCCGTTATC TGAAAGAGGG CGGCACTTTT
AAACTGGCGG CGTCTGCGGA ATTTATCGAA CGGGCGGATG CGCTGCCGGC ATTTGAAAAA
GCCTATGATT TTACCTTGAA TCAGAACCAG CTCTTGTCGC TGGCGGGCGG CGATACGGCG
GTCACGATCA AAGCCGCCGC GCAACAAACA TCCGGCGTTA ACGCCGCGAT GGCGTATGGC
ACCGACGGCC CTGTCGCCGC GCTGGGTCTG CAAACCCTGA GCGACCCGAA AGGCGTCCAG
CCTATCTATG CCCCCGCGCC GGTAGTGCGT GAATCGGTGT TACAAGCCTA TCCGCAGATA
GCCGACTGGC TGCAGCCCGT TTTCGCCAGC CTTGATGAGA AAACGCTGCA ACAGTTGAAC
GCCAGAATCG CCGTAGAAGG GCTGGATGCG AAAAAAGTCG CCGCAGATTA CCTCCGACAA
AAAGGGTGGG TGAAGTAA
 
Protein sequence
MTISKLWVSS LALLATVSLP LQAASPVTVG SKIDTEGALL GNMILQVLES HGVKTVNKIQ 
LGTTPVVRGA ITAGELDIYP EYTGNGAFFF KDENDPAWKN AKQGFEKVKK LDAEQNKLVW
LMPAPANNTW TIAVRQDIAE KNKLSSLADL SRYLKEGGTF KLAASAEFIE RADALPAFEK
AYDFTLNQNQ LLSLAGGDTA VTIKAAAQQT SGVNAAMAYG TDGPVAALGL QTLSDPKGVQ
PIYAPAPVVR ESVLQAYPQI ADWLQPVFAS LDEKTLQQLN ARIAVEGLDA KKVAADYLRQ
KGWVK