| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2364 |
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| Symbol | |
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| ID | 6516047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 2237069 |
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| End bp | 2240191 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642747425 |
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| Product | multidrug efflux system subunit MdtB |
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| Protein accession | YP_002115218 |
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| Protein GI | 194735045 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.465121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.971185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTAT TACCTCCGGG CAGCACGGGC GGCCCTTCGC GTCTGTTTAT TCTGCGCCCC
GTGGCCACCA CTCTGCTGAT GGCGGCGATT TTACTCGCCG GGATTATCGG CTATCGCTTC
CTGCCCGTCG CCGCTTTGCC GGAGGTCGAC TACCCCACTA TTCAGGTTGT TACGCTCTAC
CCTGGCGCCA GCCCGGATGT CATGACCTCC GCCGTCACCG CGCCGCTTGA GCGCCAGTTC
GGCCAGATGT CGGGACTTAA GCAGATGTCG TCGCAAAGCT CCGGCGGCGC ATCGGTGGTA
ACGCTACAGT TTCAATTGAC GCTGCCGCTG GACGTTGCCG AGCAGGAAGT ACAGGCGGCG
ATTAACGCAG CCACCAATTT ATTGCCTTCC GACCTGCCGA ATCCGCCGAT TTATAGCAAA
GTCAACCCGG CGGACCCGCC GATTATGACG CTTGCCGTCA CCTCAAACGC GATGCCGATG
ACCCAGGTAG AGGACATGGT AGAAACCCGC GTGGCGCAGA AGATCTCGCA GGTCTCCGGC
GTCGGGCTGG TGACGCTTGC CGGCGGGCAG CGCCCTGCGG TACGCGTAAA ACTGAATGCT
CAGGCTGTCG CCGCGCTCGG TCTGACCAGC GAAACGGTCC GTACCGCAAT TACCGGCGCC
AACGTCAACT CGGCGAAAGG CAGTCTGGAT GGCCCCGAAC GGGCGGTGAC GCTTTCTGCT
AACGATCAGA TGCAGTCTGC CGACGACTAC CGCAGGCTTA TCATCGCGTA TCAAAACGGC
GCGCCGGTAC GGTTGGGCGA TGTCGCCACC GTCGAACAGG GGGCGGAAAA TAGCTGGCTC
GGCGCATGGG CGAATCAAGC GCCGGCTAAC GTGATGAACG TTCAACGCCA GCCCGGCGCC
AATATCATTG CGACAGCGGA CAGCATTCGC CAGATGCTGC CCCAGCTTAC CGAAAGCCTG
CCGAAATCGG TGAAGGTCAC GGTCCTGTCC GATCGCACCA CCAATATTCG CGCTTCCGTG
CGCGATACCC AGTTTGAACT GATGCTGGCG ATCGCGCTGG TCGTCATGAT TATCTATCTG
TTTTTACGTA ACATTCCCGC CACAATTATT CCCGGCGTCG CCGTACCGCT GTCGCTTATC
GGCACCTTTG CGGTGATGGT GTTTTTGGAT TTTTCCATTA ATAACCTGAC GCTGATGGCG
CTCACTATCG CCACGGGTTT CGTGGTGGAC GATGCGATTG TGGTGATCGA GAACATCTCG
CGCTACATCG AAAAAGGAGA AAAACCGCTG GCGGCGGCGC TCAAAGGCGC GGGCGAAATC
GGCTTTACCA TTATTTCCCT CACCTTTTCC CTGATTGCGG TGCTGATCCC GTTGCTCTTT
ATGGGCGATA TTGTTGGTCG ACTGTTCCGC GAATTTGCGG TGACGTTGGC GGTAGCGATT
TTAATCTCCG CCGTCGTCTC TTTGACGCTC ACGCCCATGA TGTGCGCGCG TATGCTCAGC
CAGCAGTCTC TGCGTAAACA AAACCGCTTT TCCCGCGCCT GCGAGCGGAT GTTTGACCGC
GTGATCGCCA GCTACGGACG CGGATTAGCG AAAGTGCTCA ACCATCCGTG GCTTACATTG
AGCGTGGCAT TCGCCACGCT CCTGCTCAGC GTTATGCTGT GGATAGTCAT TCCGAAAGGG
TTCTTTCCGG TACAGGATAA CGGCATTATC CAGGGAACGC TGCAGGCGCC GCAATCGTCA
TCGTATGCCA GTATGGCGCA ACGTCAGCGC CAGGTGGCGG AGCGGATATT ACAGGACCCG
GCGGTGCAAA GCCTGACGAC TTTTGTTGGC GTAGACGGCG CTAACCCCAC GCTCAATAGC
GCGCGCCTGC AAATTAACCT CAAGCCGCTG GATGCGCGTG ATGACCGCGT GCAGCAGGTG
ATCTCCCGGC TGCAAACCGC CGTGGCGACG ATTCCCGGCG TGGCGCTGTA TCTCCAGCCG
ACGCAGGATT TAACCATCGA CACGCAGGTC AGCCGCACGC AGTATCAGTT TACCCTGCAG
GCCACGACGC TCGATGCGCT CAGTCACTGG GTGCCAAAAC TGCAGAACGC GCTACAGTCG
TTACCACAGC TCTCTGAGGT AAGCAGCGAC TGGCAAGATC GGGGATTAGC GGCCTGGGTG
AATGTCGACC GCGACAGCGC CAGCCGTCTG GGTATCAGCA TGGCGGATGT GGATAACGCG
CTCTACAACG CGTTCGGGCA ACGCCTGATT TCAACGATTT ATACCCAAGC GAACCAGTAC
CGCGTCGTAC TGGAACATAA TACCGCCAGC ACGCCGGGAC TGGCGGCGCT GGAGACGATT
CGCCTGACGA GCCGCGACGG CGGCACCGTA CCGCTCAGCG CGATTGCCCG CATTGAGCAG
CGCTTCGCTC CGCTCTCTAT CAATCATTTA GATCAGTTCC CGGTTACGAC ATTTTCGTTT
AACGTGCCGG AGGGCTATTC GCTCGGCGAT GCGGTGCAGG CGATTCTCGA TACGGAAAAA
ACGCTCGCCC TGCCAGCGGA TATTACAACG CAGTTTCAGG GCAGTACGCT CGCCTTCCAG
GCGGCGCTGG GCAGCACCGT CTGGCTTATT GTCGCCGCCG TGGTGGCGAT GTATATCGTG
CTCGGCGTGC TGTATGAGAG TTTTATCCAT CCGATCACGA TTCTCTCAAC GCTGCCTACG
GCGGGCGTCG GCGCGCTGCT GGCGCTGATC ATCGCCGGTA GCGAGCTCGA TATTATCGCC
ATTATCGGCA TTATTTTGCT GATCGGCATC GTGAAGAAAA ACGCCATCAT GATGATTGAC
TTCGCCCTCG CCGCCGAACG CGAACAGGGG ATGAGTCCGC GCGACGCTAT CTTCCAGGCC
TGTCTGCTGC GTTTTCGACC GATTCTGATG ACCACGCTGG CGGCGTTGCT CGGGGCATTG
CCATTAATGT TGAGTACCGG CGTTGGCGCG GAATTACGTC GCCCGTTGGG GATCGCAATG
GTGGGCGGCC TACTGGTCAG CCAGGTATTA ACTCTGTTTA CCACACCGGT GATTTATCTC
CTGTTTGACC GCCTGTCGCT GTACGTGAAA AGTCGCTTTC CGCGCCATAA AGAGGAGGCG
TAG
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| Protein sequence | MQVLPPGSTG GPSRLFILRP VATTLLMAAI LLAGIIGYRF LPVAALPEVD YPTIQVVTLY
PGASPDVMTS AVTAPLERQF GQMSGLKQMS SQSSGGASVV TLQFQLTLPL DVAEQEVQAA
INAATNLLPS DLPNPPIYSK VNPADPPIMT LAVTSNAMPM TQVEDMVETR VAQKISQVSG
VGLVTLAGGQ RPAVRVKLNA QAVAALGLTS ETVRTAITGA NVNSAKGSLD GPERAVTLSA
NDQMQSADDY RRLIIAYQNG APVRLGDVAT VEQGAENSWL GAWANQAPAN VMNVQRQPGA
NIIATADSIR QMLPQLTESL PKSVKVTVLS DRTTNIRASV RDTQFELMLA IALVVMIIYL
FLRNIPATII PGVAVPLSLI GTFAVMVFLD FSINNLTLMA LTIATGFVVD DAIVVIENIS
RYIEKGEKPL AAALKGAGEI GFTIISLTFS LIAVLIPLLF MGDIVGRLFR EFAVTLAVAI
LISAVVSLTL TPMMCARMLS QQSLRKQNRF SRACERMFDR VIASYGRGLA KVLNHPWLTL
SVAFATLLLS VMLWIVIPKG FFPVQDNGII QGTLQAPQSS SYASMAQRQR QVAERILQDP
AVQSLTTFVG VDGANPTLNS ARLQINLKPL DARDDRVQQV ISRLQTAVAT IPGVALYLQP
TQDLTIDTQV SRTQYQFTLQ ATTLDALSHW VPKLQNALQS LPQLSEVSSD WQDRGLAAWV
NVDRDSASRL GISMADVDNA LYNAFGQRLI STIYTQANQY RVVLEHNTAS TPGLAALETI
RLTSRDGGTV PLSAIARIEQ RFAPLSINHL DQFPVTTFSF NVPEGYSLGD AVQAILDTEK
TLALPADITT QFQGSTLAFQ AALGSTVWLI VAAVVAMYIV LGVLYESFIH PITILSTLPT
AGVGALLALI IAGSELDIIA IIGIILLIGI VKKNAIMMID FALAAEREQG MSPRDAIFQA
CLLRFRPILM TTLAALLGAL PLMLSTGVGA ELRRPLGIAM VGGLLVSQVL TLFTTPVIYL
LFDRLSLYVK SRFPRHKEEA
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