Gene SeSA_A2155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2155 
Symbol 
ID6516655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp2054736 
End bp2055938 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content50% 
IMG OID642747232 
Productouter membrane protein F 
Protein accessionYP_002115030 
Protein GI194737988 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.977291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.673078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAA AAGTTCTGGC ACTGCTTGTC CCGGCGTTAT TAGTGGCAGG CGCAGCAAAT 
GCGGCTGAAA TTTATAATAA AAATGGCAAC AAACTCGACC TGTACGGCAA AGTTGATGGT 
CTGCGTTACT TCTCTGACAA TGCAGGCGAC GATGGCGACC AGTCCTACGC CCGTATTGGC 
TTTAAAGGCG AAACGCAAAT CAACGATATG CTGACCGGCT ATGGTCAGTG GGAATACAAC 
ATTAAGGTAA ACACCACCGA AGGCGAAGGT GCAAACTCCT GGACTCGTCT GGGCTTTGCC 
GGTCTGAAAT TCGGCGAGTA CGGCTCTTTC GATTATGGCC GTAACTATGG TGTTATCTAC 
GACATTGAAG CCTGGACCGA TGCGCTGCCG GAATTCGGCG GTGATACTTA TACCCAGACC 
GATGTCTATA TGCTGGGCAG AACCAACGGC GTTGCTACCT ACCGTAATAC CGACTTCTTC 
GGTCTGGTGG AAGGCCTGAA CTTCGCGTTG CAGTACCAGG GTAATAATGA AGATCCTGGC 
GCAGGCGAAG GAACAACCAA CGGCAGCGAT GCAGATAGTG GTACTCGCAA ACTGGCCCGT 
GAAAACGGCG ACGGTTTCGG TATGTCTACC TCCTACGACT TTGACTTCGG GTTAAGCCTG 
GGGGCGGCCT ACTCTTCCTC TGACCGTACG GACAATCAGG TTGCTAGTGG GCGTGGTGAT 
GGCCATCATT ACTATGGCAA TAGCTATTCC GGCGGTGAAA CTGCCGAAGC CTGGACCGTA 
GGTGCCAAAT ATGACGCCTA CAATGTTTAC CTGGCGGCCA TGTACGCTGA AACCCGCAAC 
ATGACCTATT ATGGCGGTGG CGATGGCGGT GGCGGTGGCG GCGGTATCGC TAACAAAACC 
CAGAACTTTG AAGTGGTTGC GCAGTATCAG TTCGATTTCG GTCTGCGTCC GTCCATCGCC 
TACTTGCAGT CTAAGGGCAA AGATTTAGGC GGCCAGGATA TGGATAGCCG TGGTAACTAT 
CGTTACACCG ACAAAGATCT GGTTAAATAT GTTGACGTTG GTATGACTTA CTACTTCAAC 
AAAAATATGT CCACCTACGT TGATTATAAA ATCAACCTGC TGGACGAAGA TGATGACTTC 
TACGCAAACA ACGGTATTGC AACCGATGAT ATCGTAGGTG TTGGTCTGGT CTACCAGTTC 
TAA
 
Protein sequence
MNRKVLALLV PALLVAGAAN AAEIYNKNGN KLDLYGKVDG LRYFSDNAGD DGDQSYARIG 
FKGETQINDM LTGYGQWEYN IKVNTTEGEG ANSWTRLGFA GLKFGEYGSF DYGRNYGVIY 
DIEAWTDALP EFGGDTYTQT DVYMLGRTNG VATYRNTDFF GLVEGLNFAL QYQGNNEDPG 
AGEGTTNGSD ADSGTRKLAR ENGDGFGMST SYDFDFGLSL GAAYSSSDRT DNQVASGRGD 
GHHYYGNSYS GGETAEAWTV GAKYDAYNVY LAAMYAETRN MTYYGGGDGG GGGGGIANKT 
QNFEVVAQYQ FDFGLRPSIA YLQSKGKDLG GQDMDSRGNY RYTDKDLVKY VDVGMTYYFN 
KNMSTYVDYK INLLDEDDDF YANNGIATDD IVGVGLVYQF