Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2039 |
Symbol | edd |
ID | 6515946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1956184 |
End bp | 1957995 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642747119 |
Product | phosphogluconate dehydratase |
Protein accession | YP_002114920 |
Protein GI | 194734911 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCTA ATTTGTTACG CGTAACACAG CGCATTGTCG AACGCTCGCA GCAGACCCGA AAAGCCTATC TTGCCCGCAT TGAGCAGGCG AAAACCGCCA CGGTCCACCG ATCTCAACTG GCCTGCGGCA ACCTGGCGCA TGGCTTCGCC GCCTGTCAGC CAGAGGACAA AGCCTCGCTG AAAAGTATGT TGCGCAATAA TATCGCCATC ATTACCTCCT ACAATGACAT GCTCTCTGCG CATCAACCGT ATGAACATTA TCCGGAAATT ATTCGTCAGG CCCTGCATTC CGTGAATGCG GTAGGTCAGG TCGCAGGCGG CGTACCGGCA ATGTGCGATG GCGTTACGCA AGGGCAGGAT GGCATGGAGT TGTCATTACT CAGCCGCGAA GTGATAGCGA TGTCGGCAGC AGTAGGCCTC TCTCACAATA TGTTTGACGG CGCGTTATTC CTCGGCGTAT GCGACAAAAT CGTTCCGGGG CTGGCGATGG CCGCGCTCTC TTTTGGTCAT TTACCCGCGA TTTTTGTTCC GTCAGGCCCG ATGGCGAGCG GCCTGCCGAA TAAAGAAAAA GTCCGTATTC GTCAGCTATA TGCGGAAGGA AAAGTAGACA GAATGGCGCT GCTGGAGTCA GAGGCCGCCT CTTACCATGC GCCGGGCACC TGTACATTTT ACGGCACCGC CAACACCAAC CAGATGGTGG TGGAGTTTAT GGGAATGCAG TTGCCGGGTT CCTCGTTTGT GCATCCGGAT GCGCCGCTGC GCGAGGCATT GACTGCCGCT GCCGCACGTC AGGTAACACG TCTTACCGGC AACGGCAATA CGTGGATGCC GCTCGGTAAA ATGATCGACG AAAAAGTTGT GGTGAACGGC ATTGTCGCGC TGCTGGCTAC CGGCGGCTCC ACCAACCACA CCATGCATCT GGTTGCAATG GCGCGCGCGG CGGGCATTCT GATCAACTGG GATGACTTCT CGGATTTGTC GGAAGTGGTT CCGTTGATGG CGCGTCTGTA CCCGAACGGT CCGGCGGACA TTAACCACTT CCAGGCGGCG GGCGGCGTAC CGGTATTGAT GCGTGAGCTG CTCAATGCCG GATTGTTGCA CGAAGACGTT AACACTGTCG CAGGCTTCGG CCTGAAACGC TATACGCTGG AGCCCTGGCT CAACAACGGC GAGCTGGACT GGCGTGAAGG CGCGGAAAGG TCACTGGATA ACGATGTCAT TGCCTCTTTT GATAAGCCGT TCTCTCCTCA CGGCGGTACT AAGGTGCTAA GCGGTAATCT GGGGCGCGCA GTAATGAAGA CGTCTGCGGT ACCGGTTGAA AACCAGATCA TTGAAGCGCC TGCCATGGTA TTTGAAAGTC AGCATGATGT GCTGCCTGCG TTTGACGCGG GCCTGCTTGA CCGGGATTGT GTCGTTGTCG TGCGTCATCA GGGACCAAAA GCGAATGGAA TGCCAGAATT ACATAAACTC ATGCCGCCAC TTGGTGTATT ATTGGACCGC CGTTTCAAAA TCGCGTTAGT TACTGATGGA CGACTTTCAG GCGCTTCGGG TAAAGTGCCT TCAGCTATCC ACGTAACGCC GGAAGCCTAC GATGGCGGCT TACTGGCAAA AGTGCGCGAT GGCGACATCA TTCGCGTGAA TGGGCAGACA GGTGAGTTAA CTCTGCTGGT CGACGAGGCG GAACTTGCCG CTCGTCAGCC TCATATTCCG GACCTGAGCG CGTCGCGCGT CGGAACGGGG CGTGAGTTGT TTGGCGCGCT GCGCGAAAAG CTGTCGGGTG CGGAGCAGGG CGCAACCTGT ATCACTTTTT AA
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Protein sequence | MNPNLLRVTQ RIVERSQQTR KAYLARIEQA KTATVHRSQL ACGNLAHGFA ACQPEDKASL KSMLRNNIAI ITSYNDMLSA HQPYEHYPEI IRQALHSVNA VGQVAGGVPA MCDGVTQGQD GMELSLLSRE VIAMSAAVGL SHNMFDGALF LGVCDKIVPG LAMAALSFGH LPAIFVPSGP MASGLPNKEK VRIRQLYAEG KVDRMALLES EAASYHAPGT CTFYGTANTN QMVVEFMGMQ LPGSSFVHPD APLREALTAA AARQVTRLTG NGNTWMPLGK MIDEKVVVNG IVALLATGGS TNHTMHLVAM ARAAGILINW DDFSDLSEVV PLMARLYPNG PADINHFQAA GGVPVLMREL LNAGLLHEDV NTVAGFGLKR YTLEPWLNNG ELDWREGAER SLDNDVIASF DKPFSPHGGT KVLSGNLGRA VMKTSAVPVE NQIIEAPAMV FESQHDVLPA FDAGLLDRDC VVVVRHQGPK ANGMPELHKL MPPLGVLLDR RFKIALVTDG RLSGASGKVP SAIHVTPEAY DGGLLAKVRD GDIIRVNGQT GELTLLVDEA ELAARQPHIP DLSASRVGTG RELFGALREK LSGAEQGATC ITF
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