Gene SeSA_A2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2008 
Symbol 
ID6519132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1935069 
End bp1935593 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content56% 
IMG OID642747095 
Productputative fimbriae; usher 
Protein accessionYP_002114896 
Protein GI194737088 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.446551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.112656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATTC CCCCTGTCGC CGTCGGCGTA TTAGCCGCCG GGGGGAGTAG CCAGGTACCT 
TTCCACGTCA GCCTCGAATG TGAGTCCGGC GCCGTATCCA GCCCCCGTCC AACCATTAGT 
GCCGCCAATG TCGCAATGGG GTTTGTCGTT AATCAACCCA CCGCCGTGGC GGTGGCTCGT 
CGCCTGGGGA TAACCGCATC CGCAGGCGGT CTGTCGTGGC TACTGGACGC CCATTATGGC 
GACCCCGGCG TAGCTTCCGG AGTGGGAATT CGCATCTATA ACGATGCCGG TACGCCGATT 
AATCTGTTGC CCGATCGTAT CAGGACGGGC ATCGGCAACG CCCGAGGCTG GTATGGCTAT 
AAAGATTTAA CCACACGGGT ATCATCCGGT TCAGTAGAAA CCTACAGCGG TGATTTTACT 
GCCTCACTTG AGGCGATCGG CGGACAAACA GTAACAGCAG GAAGCGTTAA TGCGCAATTA 
CAGGCATCGC GTCGTAGTGT GTCTGGCATC TATATTACGT TATAA
 
Protein sequence
MKIPPVAVGV LAAGGSSQVP FHVSLECESG AVSSPRPTIS AANVAMGFVV NQPTAVAVAR 
RLGITASAGG LSWLLDAHYG DPGVASGVGI RIYNDAGTPI NLLPDRIRTG IGNARGWYGY 
KDLTTRVSSG SVETYSGDFT ASLEAIGGQT VTAGSVNAQL QASRRSVSGI YITL