Gene SeSA_A1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1978 
Symbol 
ID6515586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1910157 
End bp1910723 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content53% 
IMG OID642747067 
Productmembrane protein YebN 
Protein accessionYP_002114868 
Protein GI194735188 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTTTA CTGCTACTGT TCTTCTCGCT TTCGGCATGT CGATGGATGC TTTCGCGGCA 
TCAATTGGCA AAGGCGCCAC CCTACATAAA CCCAAATTCT CAGAAGCGTT GCGTACCGGC 
CTTATCTTTG GCGCGGTTGA AACGCTGACC CCGTTAATCG GCTGGGGGCT GGGGATATTG 
GCGAGTAAAT TCGTTCTGGA GTGGAACCAC TGGATAGCCT TTGTTCTGCT GATCTTTCTG 
GGCGGACGCA TGATCATCGA AGGTATCCGC GGCGGTAGTG ATGAAGACGA AACACCGTTA 
CGCCGCCACA GCTTTTGGCT ATTAGTCACG ACGGCTATCG CGACCAGCCT CGATGCGATG 
GCGGTTGGCG TCGGTCTGGC GTTTTTGCAG GTAAACATCA TCGCTACCGC ATTAGCTATC 
GGTTGCGCCA CGCTTATCAT GTCCACCCTC GGAATGATGA TCGGTCGCTT TATCGGCCCA 
ATGCTGGGTA AGCGTGCTGA AATTCTCGGC GGGGTCGTAC TGATAGGAAT TGGCGTCCAG 
ATCCTCTGGA CGCATTTTCA CGGTTAA
 
Protein sequence
MHFTATVLLA FGMSMDAFAA SIGKGATLHK PKFSEALRTG LIFGAVETLT PLIGWGLGIL 
ASKFVLEWNH WIAFVLLIFL GGRMIIEGIR GGSDEDETPL RRHSFWLLVT TAIATSLDAM 
AVGVGLAFLQ VNIIATALAI GCATLIMSTL GMMIGRFIGP MLGKRAEILG GVVLIGIGVQ 
ILWTHFHG