| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1713 |
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| Symbol | |
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| ID | 6518460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 1654813 |
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| End bp | 1656957 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642746817 |
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| Product | putative virulence effector protein |
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| Protein accession | YP_002114620 |
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| Protein GI | 194737788 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4458] Uncharacterized protein conserved in bacteria, putative virulence factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.82636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAC CGTTAAACGC CACCCAGGCT GTTATCGAGT GGGTTAACAA CACGCGCCGT
TACGCAACGC GACTGGATGA CGAAGCCGAC GCTCTGCTGG CGCAACTTAC GCTTGCCGCG
GCGGATGAGT CAGCGCTCAA CGCCGCCTGC GCATCACATG GCTGCGTTGG TCTGTACGGG
TATGCGCAAT CCGCAAAAGC GCATCTGTTA ACGACGCTAT GCGGTAACGA GAATGGCAAG
CTGGAAATTA TCACGCCGGA CCGTGACTAT GATTATTTCA GCCACATCAA TCCGGGCCAT
GCGCCAGCGA ATATGGCTAT TCGCTTTACG CGCGACATTT TTTCAAACGA GAACAGCTGG
CCGTTGCGCC TGCGCTTGAT CAGTGAAGCC GAACTGGTGC AGATCTTTAT TGCCTGGACC
AGCTCGTCCC ACATTTGTCG CCAGGTCGAA AAATCCATTA TCACATCACG CCTGGAGAAA
TGGCAATCGC TTCGCCAACC GCAGCCCGTC CCCGGCGTTA CCGCTGAAGA GGTCGCGACC
ATCGCGAGTT TCTGGCGCTC TTGTCTTCCG TCCGCCAGAC AACATATTGA TGATGCGACA
TGGCAACACT TTGCCTCGCT CTTGCCTGCG CTGGATCTCA CGACACGGGC GCACGCCTGG
GCATTACTGT GGGGAGAGCA ACCGGAGATC ACCCAGCAAT GGCTGGCGCT GGCGCATATG
TTGCAACAAA CCAGCCATGC CGGGGAACTG GCGGCGCCGC TCAGCCTGCT GGTCGATCAT
TTTGGCTTAC CGGCGGAAAA CTTCCTGACG CAAATGGCGC TAACCGCCAG CGATACGCAA
AGCGATGTGG TGGTGCATCC GGTTAAGGAA GGCCGACTGC TCAATGCGGT CAGCCTTTCG
CTTGATTCTC TGGCGCTGCT TACCCGCGAA CTGGTGCTAA CCGTTGAAAA CAGCGTACTG
GATAATGTTG ATTTACTGGA TATTCCGGTC GCGCCAGACA GTCATCCTCA TCCGTTATGG
CGGGCGAAAT TAGGCTGGAT GCTGGCCCAT TACCGTCAAC AGGTACAGCC CGATGTTCTG
GTAATTTGCA ATGCTCTGGC ATCTCGCTCG CAAACATCCG CCGCCGCCCG TCACTTACTG
GAGTGGGTTA ACGCCACGCA GCCGCAGCAT GAATCAGCGT TACCCGGCGT CGTCTGGGCT
ATTACTCCAC AGGATGCCCG TTTTGCCACC CAGCAAAATC TGGATGAAGC CGTCCAGCAG
TTGATGGGTA AACCTGGCGT GCATTGGGGA ACGCTGCAGG CGCTGGATAA ACACAGTATG
CAGCGTTTGG TGGAATGGTT ATCGCAGGCG ACATCGGCAC CACAGCGACA GGCGCGCTTA
CAGGCGTTAC GCGAACAACT GCGAGGCCGC GTGCGCGATC TGTTACCGAT GTTTGATGAC
GCGCAGCTAC CGGTTGAAAC CGTGATCCGG CGTCTTCAGG CCCAGGCCGC CAGACATGGC
GACCTGCTGG CCGGGCTGTT ACCGCCGGTA CAGAACTTCG AAGCGTTGCT ACGCACCCGA
CAGTCGCGAG AAGAACAGGT CAGCGGTTTA TTTAATGACG CGATCGATCT CTTTGCCGAC
GAACCAACGC GCGCTTCAGC GTCAGAAGGT CATGAAACAG GCTACCAGGC GCACAAAATG
TGGATCAATC ATCTGCGCCA GTGGGCCCAC TGCCGGGATA ATGCGCAGCG TCTGGGTCTG
GAACCGCAGA TGCTCAACGC CGTGGCGGAG ATTTTAATTA CCGCCAGCTA TCGCCTCGGT
TTACCTCAGC AGTTACAGAA AACCATGCAG CGCGAGGAGG TGAGCGGCGC GCAGCTTCAT
GCCATCATTG GTAACTTCAT CGCCTGGCTC GGCTACACAA ATATCGAGGA GGCCCAACGC
CCGGCCAGCC GCGTTCAGAA AGGCGCAGCC ATTTTCGCCG CAACGTCGCG TTCGACAATG
TTGCGTCTAA CAAAGCTTGA CGAACAGCCC GTTCACGCCG CCAGCCGCTA TGTCTATGAC
TGGCTTGTTG CGCTGTATAC CCTGGCCAAT GAGAACGCAG GATATCGGCA TCCGCAGGAC
GTTACCGACG TAGACAGAGA GCAATTAATT GCCCTGATAG CCTGA
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| Protein sequence | MTKPLNATQA VIEWVNNTRR YATRLDDEAD ALLAQLTLAA ADESALNAAC ASHGCVGLYG
YAQSAKAHLL TTLCGNENGK LEIITPDRDY DYFSHINPGH APANMAIRFT RDIFSNENSW
PLRLRLISEA ELVQIFIAWT SSSHICRQVE KSIITSRLEK WQSLRQPQPV PGVTAEEVAT
IASFWRSCLP SARQHIDDAT WQHFASLLPA LDLTTRAHAW ALLWGEQPEI TQQWLALAHM
LQQTSHAGEL AAPLSLLVDH FGLPAENFLT QMALTASDTQ SDVVVHPVKE GRLLNAVSLS
LDSLALLTRE LVLTVENSVL DNVDLLDIPV APDSHPHPLW RAKLGWMLAH YRQQVQPDVL
VICNALASRS QTSAAARHLL EWVNATQPQH ESALPGVVWA ITPQDARFAT QQNLDEAVQQ
LMGKPGVHWG TLQALDKHSM QRLVEWLSQA TSAPQRQARL QALREQLRGR VRDLLPMFDD
AQLPVETVIR RLQAQAARHG DLLAGLLPPV QNFEALLRTR QSREEQVSGL FNDAIDLFAD
EPTRASASEG HETGYQAHKM WINHLRQWAH CRDNAQRLGL EPQMLNAVAE ILITASYRLG
LPQQLQKTMQ REEVSGAQLH AIIGNFIAWL GYTNIEEAQR PASRVQKGAA IFAATSRSTM
LRLTKLDEQP VHAASRYVYD WLVALYTLAN ENAGYRHPQD VTDVDREQLI ALIA
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