Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1554 |
Symbol | rnfD |
ID | 6515846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1494427 |
End bp | 1495485 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642746666 |
Product | electron transport complex protein RnfD |
Protein accession | YP_002114469 |
Protein GI | 194733975 |
COG category | [C] Energy production and conversion |
COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.52008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTATTCA GAATCGCAAG CTCGCCTTAT ACCCATAACC AGCGCCAGAC ATCGCGAATC ATGTTGCTGG TATTAATCGC CGCTCTGCCG GGGATTGCCG CGCAGACGTG GTTTTTTGGT TGGGGAACGC TTTTCCAGAT CGTTCTGGCT GCCATCACGG CGCTCGTCGC GGAAGCCATT GTCCTTAGAC TGCGCAAACA ATCGGTCGCC AGTCACCTAC AGGATTATTC CGCGTTATTG ACGGGGCTTT TGCTGGCGGT CAGCATCCCT CCGCTCGCGC CCTGGTGGAT GGTCGTGCTG GGAACCGGAT TCGCCATTAT TATCGCTAAA CAGTTATATG GCGGGCTGGG ACAAAACCCC TTTAATCCGG CAATGATCGG TTACGTGGTG CTCTTAATCT CCTTTCCGGT GCAAATGACA AGCTGGTTGC CGCCTTATGA AATAGCCGCA ACAACGCCCG ATATGCTGGA CACGTTGCGG ATGATTTTTA CCGGGCATAC CGCCAGCGGC GGCGATATGA CACTGCTACG TATTGGTATT GACGGTATCA GCCAGGCGAC GCCGCTGGAT ACGTTTAAAA CGTCCTTGCG CGCCGGGCAC TCCGTTGAGC AAATCATGCA GTACCCGATA TACAGCGGCG CGCTGGCTGG CGTGGGCTGG CAGTGGGTTA ACCTCGCCTG GCTTGTCGGC GGCGTATTCC TGCTGTGGCA AAAAGCTATC CGCTGGCATA TCCCGGTCAG TTTTCTACTG ACGCTGGCGC TATGCGCCGC GTTAGGTTGG CTTTTTTCGC CCGCTACGCT GGCCTCGCCG CAGCTTCATC TGCTGTCAGG CGCCACCATG CTGGGCGCAT TTTTTATCTT GACGGATCCG GTTACCGCCT CCACGACCAA CCGTGGACGT TTAATTTTCG GCGCGCTGGC TGGGGTATTA GTGTGGCTGA TTCGTAGCTT CGGCGGCTAT CCGGACGGCG TTGCTTTTGC TGTCCTGTTG GCGAATATCA CGGTTCCTCT GATCGACTAC TACACGCGCC CCCGCGTCTA TGGACATCGC AAAGGATAA
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Protein sequence | MVFRIASSPY THNQRQTSRI MLLVLIAALP GIAAQTWFFG WGTLFQIVLA AITALVAEAI VLRLRKQSVA SHLQDYSALL TGLLLAVSIP PLAPWWMVVL GTGFAIIIAK QLYGGLGQNP FNPAMIGYVV LLISFPVQMT SWLPPYEIAA TTPDMLDTLR MIFTGHTASG GDMTLLRIGI DGISQATPLD TFKTSLRAGH SVEQIMQYPI YSGALAGVGW QWVNLAWLVG GVFLLWQKAI RWHIPVSFLL TLALCAALGW LFSPATLASP QLHLLSGATM LGAFFILTDP VTASTTNRGR LIFGALAGVL VWLIRSFGGY PDGVAFAVLL ANITVPLIDY YTRPRVYGHR KG
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