| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1517 |
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| Symbol | epaR |
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| ID | 6517818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 1463559 |
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| End bp | 1464338 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642746629 |
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| Product | type III secretion apparatus protein SpaR/YscT/HrcT |
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| Protein accession | YP_002114434 |
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| Protein GI | 194734680 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0297433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACAAC AGGTAAATGA GTGGCTTATT GCATTGGCTG TGGCTTTTAT TCGACCATTG
AGCCTCTCTT TATTACTTCC CCTATTAAAA AGTGGCAGTT TAGGGTCCGC GCTTTTACGT
AATGGCGTGC TTATGTCACT TACCTTTCCC ATATTACCAA TCATTTACCA GCAGAAGATT
ATGATGCATA TTGGTAAAGA TTACAGTTGG TTAGGGTTAG TCACCGGAGA GGTGATTATT
GGTTTTTTAA TTGGGTTTTG TGCGGCGGTT CCCTTTTGGG CCGTTGATAT GGCGGGGTTT
CTGCTTGATA CTTTACGTGG CGCGACAATG GGTACGATAT TCAATTCTAC AATGGAAGCT
GAAACCTCAC TTTTTGGCTT GCTTTTCAGC CAGTTTTTGT GTGTTATTTT CTTTATAAGC
GGCGGCATGG AGTTTATATT AAACATTCTG TATGAGTCAT ACCAATATTT ACCACCGGGG
CGTACTTTAT TATTTGATCG GCAATTTTTA AAATATATTC AGGCAGAGTG GAGAACACTT
TATCAATTAT GCATCAGTTT TTCTGTTCCT GCCATAATAT GTATGGTATT AGCCGATCTG
GCTTTAGGTC TTTTAAATCG GTCGGCACAA CAATTGAATG TATTTTTCTT CTCAATGCCG
CTCAAAAGTA TATTAGTTTT ACTAACGCTC CTGATCTCAT TCCCTTATGC TCTTCATCAC
TATTTGGTTG AAAGCGATAA ATTTTATATT TATCTGAAAG ACTGGTTCCC ATCTGTATGA
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| Protein sequence | MAQQVNEWLI ALAVAFIRPL SLSLLLPLLK SGSLGSALLR NGVLMSLTFP ILPIIYQQKI
MMHIGKDYSW LGLVTGEVII GFLIGFCAAV PFWAVDMAGF LLDTLRGATM GTIFNSTMEA
ETSLFGLLFS QFLCVIFFIS GGMEFILNIL YESYQYLPPG RTLLFDRQFL KYIQAEWRTL
YQLCISFSVP AIICMVLADL ALGLLNRSAQ QLNVFFFSMP LKSILVLLTL LISFPYALHH
YLVESDKFYI YLKDWFPSV
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