Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1479 |
Symbol | |
ID | 6516892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1428774 |
End bp | 1430000 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642746592 |
Product | putative regulatory protein DeoR family |
Protein accession | YP_002114397 |
Protein GI | 194738099 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.255884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTAAAG AAGAAAGACG TCATGCCATC ATTAATTTAC TGATAAAGGA TAATAGTGTT AGCGTCAGTA AACTTTCAGA CCTTTATAAG GTTAGCCAGG AGACTATTCG TTCCGATCTA CGCTATTTCC AGAAATCAGG TATGCTTCAG CGTTGCTATG GCGGAGGGAT TTTAAACCGT GACGCGCTGA GTAAGCTTAT CACTGAAAAT AAGATTGATA TCTCCAGCAC TATCGCCACG CCAATCCATC AGGATGCAAA ACTGCGCCGG GAAAACACAA AAAAAACAGG CAAGGTGTGT GTTTTAGGCT CATTCAATAT TGATGTTTCA GCAACCGTGC CGTGGTTTCC ACAAAGCGGA GAATCCATTC TGGCCAGTCA ATTTGGATTC TATCCTGGCG GTAAAGGAGC CAACCAGGCT TTAGCGGCAA ATAATGCCGG CGCTGCGGCA CATTTTATTT TTAAAGTGGG CAAAGATCAG TTCAGCGCAT TTGCTATGAA TCATATTATT CAATCAGGCA TCACCTCATA CAGCGCGTAT CGAACAGATA AAGCGCCCAC CGGTAGCGCA TTGATCTATG TCTCCGCCGT GGATGGCGAT AATATTATCG CCATCTACCC TGGCGCCAAT ATGATGCTCA CCACGCAAGA GATTAACGAG CAACACCGTT ATATCGCCGA GTCTGACGTT ATGTTAATGC AGCTCGAAAC GAACATTGAA GCGTTGACTG AATTTATTCG CCTGGGAAAA CAAGGAAATA AAATGATCAT GCTGAATCCT GCCCCCTATA CGAAACAGGT GACGCATTTA TTATCTGATA TTGACATCAT CACGCCGAAT GAAACTGAAG CCTCTTTTTT ATCCGGCGTA ACCATTACTG ATATTAATGA TGCGAAAAAA GCCGGAAATA TTATTCTGCA ATCCGGGGTG AAAAAAGTCA TCATTACCCT TGGCGCCCGT GGTTCTCTGC TCTGTGAGCA CGCCCGCACA TTGTATATTC CTGCGTGGAG CGCCGTGGTA AAAGATGCCG CCGGGGCCGG TGACGCTTTT AATGGCGCCT TAGCCGCCGC GCTGGCGCGA CAAGCAGACA TGGTCGCAGC CATTCAATAT GCCTCCGCTT TCGCTTCTCT GGCGGTGGAA CAAGTCGGTG CGTCGAGTAT GCCTCAGCAC TTGCAGGTTT TACATCGAAT GCGTACCCAA TCTAATAAAG TCATTCACAT TAATTAA
|
Protein sequence | MFKEERRHAI INLLIKDNSV SVSKLSDLYK VSQETIRSDL RYFQKSGMLQ RCYGGGILNR DALSKLITEN KIDISSTIAT PIHQDAKLRR ENTKKTGKVC VLGSFNIDVS ATVPWFPQSG ESILASQFGF YPGGKGANQA LAANNAGAAA HFIFKVGKDQ FSAFAMNHII QSGITSYSAY RTDKAPTGSA LIYVSAVDGD NIIAIYPGAN MMLTTQEINE QHRYIAESDV MLMQLETNIE ALTEFIRLGK QGNKMIMLNP APYTKQVTHL LSDIDIITPN ETEASFLSGV TITDINDAKK AGNIILQSGV KKVIITLGAR GSLLCEHART LYIPAWSAVV KDAAGAGDAF NGALAAALAR QADMVAAIQY ASAFASLAVE QVGASSMPQH LQVLHRMRTQ SNKVIHIN
|
| |