Gene SeSA_A1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1460 
Symbol 
ID6519929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1409090 
End bp1410208 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content56% 
IMG OID642746575 
Productputative inner membrane protein 
Protein accessionYP_002114380 
Protein GI194734868 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.539422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.149027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAATG TTCGTCAGCC CAGGGATATT GCGCAAGTGC TGCTATCGGT GCTGTTTTTA 
GCCATCATGA TTGTGGCCTG TTTGTGGATA GTACAGCCTT TTATTTTGGG GTTTGCATGG 
GCAGGTACGA TTGTTATCGC GACCTGGCCC GTTTTGCTGA AATTACAAAA AATATTGTGG 
GGCCGCCGCT CGCTTGCCGT ACTGGTCATG ACGCTGCTGT TAGTGCTGCT CTTCGTTATT 
CCCGTCGCCT TGCTGGTGAA CAGCATTGTC GACGGTAGCG GCCCGCTCAT CCATGCAGTG 
ACCGGCGGCG ATATGACGCT ACCCGATCTG GCATGGTTAA ATAATATTCC GTTAGTTGGC 
GCCAAACTGT ATGCCGGATG GCATAGCCTG CTGGATATGG GCGGTAGCGC TATTATGGCG 
AAAGTGCGGC CTTATATCGG CACAACCACG ACCTGGTTTG TCGGTCAGGC GGCGCATATC 
GGACGCTTTA TGATGCACTG CGCCCTGATG CTGTTGTTTA GCGCCCTGCT TTACTGGCGC 
GGCGAACAAG TGGCGATGGG AATACGCCAT TTTGCCTGTC GTCTCGCGGC TAAACGCGGC 
GATGCGGCGG TTCTGCTGGC TGCCCAGGCG ATCCGCGCCG TGGCGCTTGG CGTGGTGGTC 
ACCGCGCTGG TACAGGCGGT ACTTGGCGGC GTCGGGCTGG CGATTTCCGG CGTGCCTTAC 
GCTACCCTGT TGACGGTAGT GATGATCCTT TCGTGTCTGG TTCAGTTGGG GCCGTTGCCA 
GTATTGATTC CAGCCATTAT CTGGCTTTAC TGGACAGGCG ACACCACCTG GGGCACCGTG 
CTGCTGGTTT GGAGCGCCGT CGTCGGCACG CTGGATAACG TGATTCGCCC GGTACTCATC 
CGCATGGGTG CCGATTTACC GCTGCTTCTG ATCCTTTCCG GGGTAATCGG CGGACTGATT 
GCATTCGGTA TGATTGGTCT GTTTATTGGA CCGGTGCTTC TGGCCGTGAC CTGGCGTTTG 
TTCTCCGCAT GGGTACATGA AGTTCCGGCG CCGACGAATG AACCAGAGGA GATCCTTGAA 
GAGCTGGATG ACATCGAGGA AGCCAACAAG CAGTCATAA
 
Protein sequence
MVNVRQPRDI AQVLLSVLFL AIMIVACLWI VQPFILGFAW AGTIVIATWP VLLKLQKILW 
GRRSLAVLVM TLLLVLLFVI PVALLVNSIV DGSGPLIHAV TGGDMTLPDL AWLNNIPLVG 
AKLYAGWHSL LDMGGSAIMA KVRPYIGTTT TWFVGQAAHI GRFMMHCALM LLFSALLYWR 
GEQVAMGIRH FACRLAAKRG DAAVLLAAQA IRAVALGVVV TALVQAVLGG VGLAISGVPY 
ATLLTVVMIL SCLVQLGPLP VLIPAIIWLY WTGDTTWGTV LLVWSAVVGT LDNVIRPVLI 
RMGADLPLLL ILSGVIGGLI AFGMIGLFIG PVLLAVTWRL FSAWVHEVPA PTNEPEEILE 
ELDDIEEANK QS