Gene SeSA_A1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1427 
Symbol 
ID6519153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1375056 
End bp1375910 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content52% 
IMG OID642746544 
ProductDNA/RNA non-specific endonuclease 
Protein accessionYP_002114349 
Protein GI194737240 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1864] DNA/RNA endonuclease G, NUC1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000987613 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.000225479 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAATAAGA CCATTAATTT GCTAAAATTA CTGCCCGTAG TATTATTAAG CGCATGTACT 
ACATCGTATC CTCCCCAGGA TACAACATCG GCACCCGAGT TACCCCATCG TAACGTACTC 
GTTCAGCAAC CTGATAACTG TAGCGTTGGC TGTCCTCAAG GAGGAAGTCA ACAAACAATC 
TATCGCCATG TCTATACGCT CAATAATAAT AGCGCCACGA AATTTGCCAA CTGGGTTGCC 
TATAGCGTGA CAAAGACCAG CCAGGCAAGC GGTCGCCCGC GGAACTGGGC GCAGGACCCC 
GATTTACCGC CCTCGGATAC GTTGGCCCCT TCCGCCTATA AAAATGCCCA TGCGCTATTA 
AAAGTCGACA GGGGACACCA GGCGCCGTTG GCAGGATTGG GCGGCGTATC GGACTGGCCG 
TCGTTAAATT ATTTATCGAA TATTACGCCG CAGAAATCCG CCCTGAATCA GGGAGCATGG 
GCTGCACTGG AAAACCGGGT GCGCGAACTT GCCAAACAGG CTGATGTATC TGTAGTGCAC 
GTAGTGACCG GCCCCCTTTT TGAGCGGCAT ATCGCCACAT TGCCAGAAGA TGCGACGGTA 
GAAATTCCCA GCGGGTACTG GAAGGTTTTA TTCACCGGAA CGGCGCCGTC AAAAAGTGAA 
GGAAATTACG CTGCGTTTAT TATGGATCAG AATACGCCCC GTTCGGCGAA TTTTTGCGAC 
TATCAGGTTA CCGTGGAGGC TATCGAACAT AAAACGAAGC CAGTGCTGAC GCTGTGGTCT 
GCCTTGCCTG AAGCGGTAGC CAGCGAGGTG AAAACGACAA AGGGGAGTCT GGCGCAGAAG 
TTAGGTTGTC GATGA
 
Protein sequence
MNKTINLLKL LPVVLLSACT TSYPPQDTTS APELPHRNVL VQQPDNCSVG CPQGGSQQTI 
YRHVYTLNNN SATKFANWVA YSVTKTSQAS GRPRNWAQDP DLPPSDTLAP SAYKNAHALL 
KVDRGHQAPL AGLGGVSDWP SLNYLSNITP QKSALNQGAW AALENRVREL AKQADVSVVH 
VVTGPLFERH IATLPEDATV EIPSGYWKVL FTGTAPSKSE GNYAAFIMDQ NTPRSANFCD 
YQVTVEAIEH KTKPVLTLWS ALPEAVASEV KTTKGSLAQK LGCR