Gene SeSA_A1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1405 
Symbol 
ID6516840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1355789 
End bp1356670 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content56% 
IMG OID642746523 
Productnucleotide excision repair endonuclease 
Protein accessionYP_002114328 
Protein GI194736134 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.115833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTACGGC GTCAATCAGC CCCCCGCCTT GAGTTTGAAG CGGCGGCCAT TTACGAATAT 
CCAGAACATT TACGTCCTTT CCTCAGCGAA GCGCCAGCCT TACCGGGCGT CTATATATTT
CATAGCGAAA GCGATACGCT GCCGCTTTAT ATCGGTAAAA GCGTAAATAT TCGCAGCCGG
GTGCTCTCAC ATCTGCGAAC GCCTGACGAG GCCGCTATGC TGCGACAGGC GCGGCGGATA
AGCTGGATCT GCACCGCTGG GGAAATGGGC GCGTTGCTGC TGGAGGCGCG GCTGATCAAA
GAACAACAGC CGCTGTTTAA CAAGCGGTTA CGGCGTAATC GCCAGCTTTG CTCTCTACAG
TTGAGCGAAC AAAAGATTGA GGTCGTTTCC GCCCGCAGCG TCGATTTTTC CCATGAGCCG
AACCTGTTTG GGCTCTTCGC CAACCGTCGG GCGGCGCTGC AAAGCTTACA GAACCTCGCC
GATGAACAAA AATTGTGTTA TGGCCTGCTG GGGCTTGAAC CGGTAAGCCG TGGGCGCGCC
TGTTTTCGTT TCGCTCTGAA GCGCTGCGCT GGCGCGTGCT GTGGGCAAGA AACCCCGCAG
GCGCATTTTC TTCGTCTGCA GGCCTCGCTG GAACGGTTAC GTGTGGTTTG CTGGCCCTGG
AAAGGCGCTA TCGCGTTAAA AGAGAGCCGC CCACAAATGA CCCAGTTCCA CATTATCAAC
AACTGGTTAT GGCTGGGGGC GGTCCCCTCG CTGGATGAGG CCGCCACCCT GGTGCGCACC
CCTGCGGGCT TTGATCAGGA TGGCTATAAA ATTCTCTGTA AGCCACTAAT GTCAGGTCAA
TATGAGATCA TTGAACTGCA CACCGACTGT CGCCAGTCAT AA
 
Protein sequence
MVRRQSAPRL EFEAAAIYEY PEHLRPFLSE APALPGVYIF HSESDTLPLY IGKSVNIRSR 
VLSHLRTPDE AAMLRQARRI SWICTAGEMG ALLLEARLIK EQQPLFNKRL RRNRQLCSLQ
LSEQKIEVVS ARSVDFSHEP NLFGLFANRR AALQSLQNLA DEQKLCYGLL GLEPVSRGRA
CFRFALKRCA GACCGQETPQ AHFLRLQASL ERLRVVCWPW KGAIALKESR PQMTQFHIIN
NWLWLGAVPS LDEAATLVRT PAGFDQDGYK ILCKPLMSGQ YEIIELHTDC RQS