Gene SeSA_A1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1383 
Symbol 
ID6515862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1334153 
End bp1335037 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content53% 
IMG OID642746501 
Productaldose 1-epimerase 
Protein accessionYP_002114306 
Protein GI194734023 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0676] Uncharacterized enzymes related to aldose 1-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.548696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.323946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATA AAATTTTTGC CCTCCCGGTT ATCGAACAGC TTACCCCTGT CCTTTCCCGT 
CGTCAGCTTG ATGACCTGGA TCTGATCGTC GTTGACCATC CGCAGGTTAA AGCCTCTTTT 
GCATTACAGG GCGCGCACCT TCTCTCCTGG AAACCCGTTG GCGAGGAAGA GGTATTGTGG 
CTCAGTAATA ATACGCCTTT CAAAACCGGC GTGGCGCTAC GCGGCGGCGT ACCGATCTGC 
TGGCCCTGGT TTGGACCTGC GGCTCAACAG GGTCTGCCGT CACACGGCTT TGCGCGTAAT 
CTACCGTGGG CGCTAAAAGC GCATAATGAA GATGATAATG GCGTAATGCT GACATTTGAG 
CTGCAAAGCA GTGAGGCCAC CCGGAAATAC TGGCCGCACG ATTTCACGCT GCTGGCACGT 
TTTAAAGTGG GCAAAACCTG TGAAATTGAA CTGGAAGCGC ATGGCGAGTT TGCAACCACA 
TCCGCGCTCC ACAGCTATTT TAACGTTGGC GACATCGCCA ACGTTAAGGT CAGCGGACTC 
GGCGATCGGT TTATTGATAA AGTTAACGAC GCTAAAGAAG GTGTCCTGAC CGACGGTATG 
CAAACCTTTC CGGACCGTAC CGATCGCGTT TACCTCAATC CTGAAGCATG TAGCGTGATC 
CACGATGCGA CATTAAACCG CACGATTGAT GTGGTCCACC ACCATCATCT TAACGTCGTA 
GGCTGGAACC CTGGCCCGGC GTTGTCCGTC AGCATGGGCG ACATGCCGGA TGACGGCTAT 
AAAACGTTTG TCTGCGTTGA AACGGCTTAT GCTACTGCGC CGCAACAAGC CACAGAAGAA 
AAACCCTCTC GTCTGGCGCA GACTATCTGC GTCGCAAAAC GCTAA
 
Protein sequence
MINKIFALPV IEQLTPVLSR RQLDDLDLIV VDHPQVKASF ALQGAHLLSW KPVGEEEVLW 
LSNNTPFKTG VALRGGVPIC WPWFGPAAQQ GLPSHGFARN LPWALKAHNE DDNGVMLTFE 
LQSSEATRKY WPHDFTLLAR FKVGKTCEIE LEAHGEFATT SALHSYFNVG DIANVKVSGL 
GDRFIDKVND AKEGVLTDGM QTFPDRTDRV YLNPEACSVI HDATLNRTID VVHHHHLNVV 
GWNPGPALSV SMGDMPDDGY KTFVCVETAY ATAPQQATEE KPSRLAQTIC VAKR